Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 8e-17
seq40 82.4 7e-11
>seq12
Length=722896
Score = 102 bits (112), Expect = 8e-17
Identities = 350/529 (66%), Gaps = 24/529 (5%)
Strand=Plus/Plus
Query 50194 TACTCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAAT 50253
|| |||| ||| | ||||| |||| ||| | | |||| | || ||||| |||| ||
Sbjct 313910 TATTCAATGCTATTGATAACGTTCCATGTATCAGAGAAAAAGCGGACTGGGCTTTGAGAT 313969
Query 50254 GGACTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAA 50312
||| | | |||| ||| ||||| ||| | || || || ||||| |||||
Sbjct 313970 GGATTTCTGATGAAAATGCTTTGTTTGGT-GAAAGATTGGTTGCCTTTGCTGCTGTTGAG 314028
Query 50313 GGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATG 50372
||| | || || || ||| ||||| ||||| || | | || | ||| | |||
Sbjct 314029 GGTATTTTCTTCTCTGGTTCTTTTGCTGCCATCTTCTGGTTGAAGAAGAGAGGTTTGATG 314088
Query 50373 CCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTT 50432
|| || | || || ||||| ||||| | | || ||||| |||| || || ||
Sbjct 314089 CCAGGTTTGACTTTCTCTAACGAATTGATCTGTAGAGATGAAGGTCTGCATACTGATTTC 314148
Query 50433 GCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAATTTTGGA 50491
|| ||||||| || | | | | |||| || | | | ||| |||| | |
Sbjct 314149 GCTTGTTTGTT-----ATTCTCTC--ACTTGAACAACACCCCAGATGAAGAAATTGTTGC 314201
Query 50492 CATGTT---CAAAGAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGCTTTACCCG 50547
|| | | || |||||||| ||||| ||||| ||| | ||||| || ||||| || |
Sbjct 314202 CAAGATTATCACTGAAGCCGTTGACATTGAAAA-GAGATACTTCACTGATGCTTTGCCAG 314260
Query 50548 TGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACA 50607
| |||||||| |||||| ||| ||||||| | ||| |||| |||||||| ||||
Sbjct 314261 TCAAGTTGTTGGGTATGAACTGTGACTTGATGTGTCAATACGTTGAATTTGTTGCTGACA 314320
Query 50608 GATTGTT-GTTGCAGCTGGGA--CAACCGAAATACTATAATG-CACGTAACCCCTTTCCG 50663
||||||| ||||| ||||| ||| ||| ||| || | ||| ||||| ||
Sbjct 314321 GATTGTTGGTTGC-TTTGGGATGCAA--GAAGATCTACAACGTCAC-AAACCCATTCGAC 314376
Query 50664 TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGA 50711
|| ||| | || || || |||| || || || ||||| ||||| ||||
Sbjct 314377 TTCATGGAAAATATTTCCTTGGCTGGTAAGACTAACTTCTTCGAGAAGA 314425
>seq40
Length=167105
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259
||||| || |||| || ||||| ||||| |||||||| || || || || |||
Sbjct 19975 AAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCT 19916
Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319
|| | ||| |||||||| | || | | || ||||| || || || || || || ||
Sbjct 19915 TCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCT 19856
Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379
|| ||| ||| | | || | ||||| | | ||| ||||| | ||| | |||
Sbjct 19855 TGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTC 19796
Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| || ||||||||||| || || |||||||||
Sbjct 19795 TTACCAGTCAATGTTTTAACAAAGATTTGCATA 19763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543279397600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |