Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq23 203 8e-47 seq17 123 6e-23 seq49 114 3e-20 seq38 91.5 3e-13 >seq23 Length=373761 Score = 203 bits (224), Expect = 8e-47 Identities = 466/696 (67%), Gaps = 7/696 (1%) Strand=Plus/Plus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTT 110528 |||||| |||| || | |||||||| || ||| | | |||| || | ||||| ||| Sbjct 128231 CATGCTTCTCCAACTTTGTTTAACGCTGGTACTCCTCGCCCACAAATGTCCTCTTG-TTT 128289 Query 110529 CTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGC 110587 ||| | | || || || |||||||||||||||||||||||| | | || || ||| Sbjct 128290 CTTGGTTGCCATGAAGGAAGATTCTATTGAAGGTATTTATGATACATTGAAGGAGTGTGC 128349 Query 110588 TCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGG 110647 ||| |||||||| | | || || |||||| | ||| |||| | ||| | | | || Sbjct 128350 TCTGATTTCTAAGACTGCAGGTGGTATTGGTCTACACATTCACAACATTAGAGCCACTGG 128409 Query 110648 AGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTT 110707 | | ||||| | || ||| |||||| ||| | |||| ||| | ||||| || Sbjct 128410 TTCTTACATCGCCGGTACCAACGGTACTTCAAATGGTATCATTCCTATGGTTAGAGTTTT 128469 Query 110708 CAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTAT 110764 |||| | ||||| | |||||| ||||||||||| |||||| ||| | ||||| | Sbjct 128470 CAACAATACTGCTAGATATGTTGATCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCCCT 128529 Query 110765 CTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGG 110824 ||| | ||||| ||||| | || || ||||| || | || | | || ||||| || Sbjct 128530 TTATATTGAACCATGGCACGCTGACATCTTTGACTTTATTGATATCAGAAAGAATCACGG 128589 Query 110825 ATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCAT 110884 |||||| ||||| | ||||| || || |||||||| ||||||| ||||| Sbjct 128590 TAAAGAAGAAATCAGAGCCAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCAT 128649 Query 110885 GAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCT 110944 ||| | ||| || ||| ||| || | | | ||| | | |||| ||| | Sbjct 128650 GAAGAGAGTTGAATCTAATTCTGAATGGACTTTGTTCTCACCTTCTGATGCTCCAGGTTT 128709 Query 110945 ATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAA 111004 |||||| || ||||| | |||||||| | | ||| || ||||||| ||||| | Sbjct 128710 ATCTGAGGTTTATGGTGATGAGTTTGAGAAGTTGTACACCAAGTATGAAACTGAAGGTAG 128769 Query 111005 GTTTCGCAAACA-AATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTG 111063 | | || || || |||||| | | |||| | ||| | ||| | ||| || Sbjct 128770 AGGTAG-AACCACTGTTAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACTG 128828 Query 111064 AAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGA 111123 ||||||| ||||||| || ||||| |||||| | ||| || ||||| |||| || Sbjct 128829 AAACTGGTACTCCTTTCATGTTGTACAAAGATGCTTGTAACAAAAAGTCTAACCAAAAGA 128888 Query 111124 ATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 | || || || ||||| || ||||| |||| Sbjct 128889 ACTTGGGTGTTATCAAGTCATCCAACTTGTGTTGTG 128924 >seq17 Length=626534 Score = 123 bits (136), Expect = 6e-23 Identities = 261/384 (68%), Gaps = 9/384 (2%) Strand=Plus/Plus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 ||||||||| | | | || || || || || || || || |||| | || || | Sbjct 353758 TCTTGCTTTTTGGTTGCTATGAAGGACGACTCCATCGATGGCATTTTCAAAACTGTTCAT 353817 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 |||| || |||||||| ||| |||| || |||| | || ||| ||||||| Sbjct 353818 CAAACAGCACTTATTTCGAAATGTGCTGGTGGTGTTGGATTACATGTTTCAAATATTCGT 353877 Query 110640 TCAAAAGG-AGCAA-ATATC-GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATG 110696 | || ||| | ||||| | |||| || || |||| |||| | || || ||| Sbjct 353878 GCCTCGGGTAGCTACATATCTGGAACA---AATGGAATGTCAAGTGGATTGGTGCCGATG 353934 Query 110697 TTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---GGC 110753 || | || || || | ||||| || ||||| ||||||||||||| | || || Sbjct 353935 TTGCGGGTGTTTAATGCTACTGCCAAGTATGTTGATCAAGGTGGTAATAAAAGACCAGGA 353994 Query 110754 TCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT 110813 ||||| || ||||| |||||||||||| ||||||| |||||||| || ||| | | Sbjct 353995 GCATTTTGCATATATCTTGAACCTTGGCATGCAGATATTTTTGAATTTTTGGAATTGAGA 354054 Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 || || || ||| |||||| | |||| | ||||| |||||||| | ||||| ||| Sbjct 354055 AAGAACCATGGAAAGGAAGAAGTGAAAGCAAGAGATTTGTTTTATGCCCTTTGGATATCA 354114 Query 110874 GATTTATTCATGAAACGTGTTCAA 110897 || | |||||| || |||||| Sbjct 354115 GACCTTTTCATGGAAAAAGTTCAA 354138 >seq49 Length=119707 Score = 114 bits (126), Expect = 3e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||| ||||| || ||||| ||| |||||| | | ||||| || | ||| | |||| Sbjct 4356 GTTCTTTTCAACAGACAACCTTCATTGCATAGATTATCTATTCTGTCACATTTTGCCAAA 4415 Query 305390 GT-ATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGA 305448 || || ||||| || ||| |||| |||| | ||| |||||| |||||||| || || Sbjct 4416 GTCATGCCCTGGAGA-ACCTTTAGATTCAATGAATGTGTTTGTACACCTTATAACGCAGA 4474 Query 305449 TTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 ||||||||| |||||||||||| ||||||| || ||| || Sbjct 4475 TTTTGATGGTGATGAAATGAATTTGCATGTCCCACAAACA 4514 >seq38 Length=199180 Score = 91.5 bits (100), Expect = 3e-13 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 72175 CCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGCAAGTGTAATGAAGAATTGC 72234 ||||||||||| ||||| || |||||||| ||| || || |||||||||||| Sbjct 2699 CCAAACACAACATGTTTACCATCCAAATGTGGAGTAGGAACAGTGGTGATGAAGAATTGC 2758 Query 72235 GAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTCTGAATGCTTT 72294 || ||| | | | ||||| | || |||||||| | ||| || || || || Sbjct 2759 GATCCATTGGTACCTGGACCAGCATTGGCCATAGACAACAAGAATGGTTTCTCGTGTTTC 2818 Query 72295 AATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATAT--ACTTTGACCTGAGCTTCCAT 72352 |||| |||||||||||||||||| | |||||||| || |||| ||| | |||| Sbjct 2819 AATATGAAATTCTCATCTTCAAATTTCTCTCCATAGATTGACTT--ACCACCAGTACCAT 2876 Query 72353 CAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTACTCTATGGAAA 72408 || || | |||||| ||||||| ||| || | || || || | |||||| Sbjct 2877 TGAAATTTGTGAAATCACCACCTTGAATCATGAATTGTTTGATCACACGGTGGAAA 2932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811005687398