Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq40 107 1e-18 seq3 105 4e-18 seq17 102 5e-17 >seq40 Length=167105 Score = 107 bits (118), Expect = 1e-18 Identities = 173/245 (71%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 33509 AAATAAAATC--GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTG 33566 || ||| ||| || |||||||||||| | ||| ||||| || ||||| || ||||| Sbjct 20006 AATTAACATCTAGTTACCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTG 19947 Query 33567 TATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACG 33626 |||||||| || || | || | | || || ||||| || || || ||||| || | Sbjct 19946 GATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCT 19887 Query 33627 CTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGG 33685 ||| ||||| | || | ||| || || || || || || || ||| | || | || Sbjct 19886 CTGTTGATCAGGTGGAATACCCTCCTTATCTTGGATCTT-TGATTTAACGTTATCAATGG 19828 Query 33686 TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCT 33745 |||| |||||| || || | ||||| || ||||| || || ||||| |||||||| | Sbjct 19827 TGTCAGATGATTCAACTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTT 19768 Query 33746 GCATA 33750 ||||| Sbjct 19767 GCATA 19763 >seq3 Length=1000385 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || | |||| || ||||| |||||||| ||||| Sbjct 936293 ACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 936352 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||||||| || |||||||| ||||| | || ||||| | || Sbjct 936353 CAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGG 936412 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || || || | | |||| ||| | ||||||| ||||| | Sbjct 936413 GATACCTTCCTTATCTTGGATCTT-GGACTTGACATTGTCAATGGTGTCGGAAGATTCAA 936471 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | || || || ||||| || || || || ||||| || ||||| || Sbjct 936472 CTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATTGT 936523 >seq17 Length=626534 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| || |||||| || ||||| |||||||| || | Sbjct 620748 CACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAG 620807 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||||||||| | || || || | | Sbjct 620808 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 620867 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | |||||| ||||| Sbjct 620868 GGATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATGGTGTCAGAGGATTCG 620926 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || |||||||| | || || ||||| || ||||| Sbjct 620927 ACCTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 620976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703527282560