Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq40 116 3e-21
seq3 93.3 4e-14
seq17 91.5 1e-13
>seq40
Length=167105
Score = 116 bits (128), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| |||||||| || || || | ||||| | ||||| ||| |
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || ||| ||| || ||||| |||||||| || || |||||
Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| || || || ||| | ||||||| ||||| |||| | | ||||
Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTG--ACTACA 19941
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404
| || ||||| ||||| || |||| || || |||||||||||||| || ||
Sbjct 19942 ACATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAA 19993
Score = 89.7 bits (98), Expect = 5e-13
Identities = 102/136 (75%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327
||||| || ||||| || || || || |||||| | |||| || || || ||| | |||
Sbjct 19629 GATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAA 19688
Query 25328 GATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGT 25385
|||| ||||| |||| | | ||||| || ||||| ||||| || |||| || ||||
Sbjct 19689 GATGGTAGAACYTTGTCTG--ACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGT 19746
Query 25386 TAAGATTGAGAGGAGG 25401
| ||||||||||| ||
Sbjct 19747 TGAGATTGAGAGGTGG 19762
>seq3
Length=1000385
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || || || || || || | || || | ||||| ||| | |
Sbjct 936520 ATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTCC 936461
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || || || ||||| || ||||| || || |||||
Sbjct 936460 GACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 936401
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | || | | ||| || ||| | ||||| | ||||| |||| ||| ||||
Sbjct 936400 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTC--CGACTACA 936343
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||| |||||||| | || || || || ||||||||||| ||
Sbjct 936342 ACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294
>seq17
Length=626534
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| |||||| | ||||| || || | || || || | ||||| | || |||||| ||
Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920
Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291
|| || || || | || || || || || || || ||||| || || ||
Sbjct 620919 TCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 620860
Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351
|| |||||| | |||| | || || ||| | ||||||| ||||| | | || |||
Sbjct 620859 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 620800
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| |||||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 620799 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093743485760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |