Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq23 125 8e-24 seq12 82.4 8e-11 >seq23 Length=373761 Score = 125 bits (138), Expect = 8e-24 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 55734 AGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATC 55793 |||||||| ||| |||||||| ||| | || ||| | | ||||| ||| |||||| Sbjct 129675 AGATTTACAAGACTGTGTGGGAAATTTCTCAAAAGGCTATTATTGATATGTCTGCTGACA 129734 Query 55794 GTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGG 55853 | ||||| ||| |||| || ||||| ||| ||||||| | || |||| || | ||| Sbjct 129735 GAGGTGCTTACGTCGATCAATCCCAATCTTTGAACATTCACTTGAAGAACCCAACCATGG 129794 Query 55854 CCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACT 55913 ||||||| || ||||| || ||||| ||||||||||| | ||||| |||||||| | Sbjct 129795 GTAAGTTGACTTCCATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTATT 129854 Query 55914 ATCT 55917 |||| Sbjct 129855 ATCT 129858 Score = 114 bits (126), Expect = 1e-20 Identities = 301/457 (66%), Gaps = 2/457 (0%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| |||| ||| ||||| || || || || || | ||||| |||| ||| Sbjct 128195 GAGACTTACAACTTGATGTCCCAAAGATATTTCACCCATGCTTCTCCAACTTTGTTTAAC 128254 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| || ||| || ||||| || ||| |||| || |||||||| || || Sbjct 128255 GCTGGTACTCCTCGCCCACAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAAGATTCT 128314 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || || || || || | ||||||||||| | || || ||| | |||||| Sbjct 128315 ATTGAAGGTATTTATGATACATTGAAGGAGTGTGCTCTGATTTCTAAGACTGCAGGTGGT 128374 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| | | || | || | ||| || || ||||| Sbjct 128375 ATTGGTCTACACATTCAC-AACATTAGAGCCACTGGTTCTTACATCGCCGGTACCAACGG 128433 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | |||| ||| | |||||| | | || |||||||| || || | || || | Sbjct 128434 TACTTCAAATGGTATCATTCCTATGGTTAGAGTTTTCAACAATACTGCTAGATATGTTGA 128493 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || |||||| ||| | || | || ||| | || | || || |||||||| || Sbjct 128494 TCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCCCTTTATATTGAACCATGGCACGCTGA 128553 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661 ||| | || ||| | || | | |||||| ||| | ||||| || | | | || Sbjct 128554 CATCTTTGACTTTATTGATATCAGAAAGAATCACGGTAAAGAAGAAATCAGAGCCAGAGA 128613 Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 |||| ||||| |||||||||| || | |||||| Sbjct 128614 TTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATG 128650 >seq12 Length=722896 Score = 82.4 bits (90), Expect = 8e-11 Identities = 196/292 (67%), Gaps = 7/292 (2%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| | |||||||| || || || | | || ||||| | || | |||| Sbjct 314132 CCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTC 314073 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||| ||||||||| || |||||| |||||| || || || ||| |||||| Sbjct 314072 TTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAG 314013 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCA---TCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945 || || | | || | ||| ||| || || ||||| || |||||| || Sbjct 314012 GCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCC 313953 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTCTT 75003 |||||| | ||| || || |||| || || | ||| | | | |||| ||| Sbjct 313952 GCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTC-CTT 313894 Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 ||||||||||| ||||||||| || ||||| || || || || || Sbjct 313893 -TGGATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTTTCAGAGTGGAT 313843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215192856400