Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 8e-24
seq12 82.4 8e-11
>seq23
Length=373761
Score = 125 bits (138), Expect = 8e-24
Identities = 138/184 (75%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 55734 AGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATC 55793
|||||||| ||| |||||||| ||| | || ||| | | ||||| ||| ||||||
Sbjct 129675 AGATTTACAAGACTGTGTGGGAAATTTCTCAAAAGGCTATTATTGATATGTCTGCTGACA 129734
Query 55794 GTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGG 55853
| ||||| ||| |||| || ||||| ||| ||||||| | || |||| || | |||
Sbjct 129735 GAGGTGCTTACGTCGATCAATCCCAATCTTTGAACATTCACTTGAAGAACCCAACCATGG 129794
Query 55854 CCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACT 55913
||||||| || ||||| || ||||| ||||||||||| | ||||| |||||||| |
Sbjct 129795 GTAAGTTGACTTCCATGCATTTCTACGGTTGGAAGAAGGGTTTGAAGACTGGTATGTATT 129854
Query 55914 ATCT 55917
||||
Sbjct 129855 ATCT 129858
Score = 114 bits (126), Expect = 1e-20
Identities = 301/457 (66%), Gaps = 2/457 (0%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||| ||| |||| ||| ||||| || || || || || | ||||| |||| |||
Sbjct 128195 GAGACTTACAACTTGATGTCCCAAAGATATTTCACCCATGCTTCTCCAACTTTGTTTAAC 128254
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|||||||| || ||| || ||||| || ||| |||| || |||||||| || ||
Sbjct 128255 GCTGGTACTCCTCGCCCACAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAAGATTCT 128314
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
|| || || || || || || | ||||||||||| | || || ||| | ||||||
Sbjct 128315 ATTGAAGGTATTTATGATACATTGAAGGAGTGTGCTCTGATTTCTAAGACTGCAGGTGGT 128374
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| | ||| | | | ||| | | || | || | ||| || || |||||
Sbjct 128375 ATTGGTCTACACATTCAC-AACATTAGAGCCACTGGTTCTTACATCGCCGGTACCAACGG 128433
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| |||| ||| | |||||| | | || |||||||| || || | || || |
Sbjct 128434 TACTTCAAATGGTATCATTCCTATGGTTAGAGTTTTCAACAATACTGCTAGATATGTTGA 128493
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
|| |||||| ||| | || | || ||| | || | || || |||||||| ||
Sbjct 128494 TCAAGGTGGTAACAAGAGACCTGGTGCTTTTGCCCTTTATATTGAACCATGGCACGCTGA 128553
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661
||| | || ||| | || | | |||||| ||| | ||||| || | | | ||
Sbjct 128554 CATCTTTGACTTTATTGATATCAGAAAGAATCACGGTAAAGAAGAAATCAGAGCCAGAGA 128613
Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
|||| ||||| |||||||||| || | ||||||
Sbjct 128614 TTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATG 128650
>seq12
Length=722896
Score = 82.4 bits (90), Expect = 8e-11
Identities = 196/292 (67%), Gaps = 7/292 (2%)
Strand=Plus/Minus
Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828
||||||||||| | |||||||| || || || | | || ||||| | || | ||||
Sbjct 314132 CCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTC 314073
Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888
|||||||| ||||||||| || |||||| |||||| || || || ||| ||||||
Sbjct 314072 TTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAG 314013
Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCA---TCGGAAGTCATCCAAGTCTGAGCCCATTCA 74945
|| || | | || | ||| ||| || || ||||| || |||||| ||
Sbjct 314012 GCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCC 313953
Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTCTT 75003
|||||| | ||| || || |||| || || | ||| | | | |||| |||
Sbjct 313952 GCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTC-CTT 313894
Query 75004 CGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055
||||||||||| ||||||||| || ||||| || || || || ||
Sbjct 313893 -TGGATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTTTCAGAGTGGAT 313843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215192856400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |