Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 141 1e-28 seq40 134 2e-26 seq23 122 1e-22 seq3 98.7 1e-15 >seq17 Length=626534 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 ||| |||| |||||||| ||||| ||||| ||||| || ||||| || ||| | ||||| Sbjct 620986 TATAACTAAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGT 620927 Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 || || ||| | ||||| ||| | ||| | || || || |||||||| || || || Sbjct 620926 CGAATCCTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 620867 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575 || ||||| || | | |||||||||||||||||| | || |||| | | || | | Sbjct 620866 ACCTGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTC 620807 Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||||| || | |||||||||||||||||||| Sbjct 620806 TGACTACAACATTCAAAAGGAATCCACTCTTCA 620774 >seq40 Length=167105 Score = 134 bits (148), Expect = 2e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | || || |||||||| ||| | || ||||| ||| | Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | || | || || || || |||||||| ||||| || || || Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | ||||||| |||||||||||| | || |||| | | || | | ||||| || Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAAC 19943 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 ||||||||||||| |||||||| Sbjct 19944 ATCCAAAAGGAATCAACTCTTCA 19966 Score = 93.3 bits (102), Expect = 5e-14 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27452 AGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAA 27511 |||| || ||| ||| | ||||| ||| | ||| | || || || || ||||| || | Sbjct 19582 AGGTCGAATCATCTGACACCATTGACAATGTTAAGTCCAAGATWCAAGATAAGGAAGGTA 19641 Query 27512 TTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCC 27571 |||| || ||||| || | | ||||| |||||||||||| | || |||| | | || Sbjct 19642 TTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYT 19701 Query 27572 TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 | | ||||| || | ||||||||||| || ||||| Sbjct 19702 TGTCTGACTACAACATYCAAAAGGAATCAACWCTTCA 19738 >seq23 Length=373761 Score = 122 bits (134), Expect = 1e-22 Identities = 283/424 (67%), Gaps = 11/424 (3%) Strand=Plus/Minus Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC------CTT 81371 |||||| | |||||| || |||||||| || | ||| | ||| | | || ||| Sbjct 128566 AAAGTCAAAGATGTCAGCGTGCCATGGTTCAATATAAAGGGCAAAAGCACCAGGTCTCTT 128507 Query 81372 GCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431 | || |||| || | || || | ||||| ||| || || | | |||||| || Sbjct 128506 GTTAC---CACCTTGATCAACATATCTAGCAGTATTGTTGAAAACTCTAACCATAGGAAT 128450 Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCT 81491 |||||||| ||| |||||| ||||| |||| || || |||| | | ||| | Sbjct 128449 GATACCATTTGAAGTACCGTTGGTACCGGCGATGTAAGAACCAGTGGCTCTAATGTTG-T 128391 Query 81492 GATTGAA-AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCT 81550 || || ||||| || ||||||| ||| |||||| |||||||| |||| || | Sbjct 128390 GAATGTGTAGACCAATACCACCTGCAGTCTTAGAAATCAGAGCACACTCCTTCAATGTAT 128331 Query 81551 CATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAG 81610 ||||||| || || || ||||| |||||| ||| ||||||||| ||||| || | Sbjct 128330 CATAAATACCTTCAATAGAATCTTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGTG 128271 Query 81611 GGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670 ||| | || || || |||| ||||| | || || ||||||| | | |||| Sbjct 128270 GGCGAGGAGTACCAGCGTTAAACAAAGTTGGAGAAGCATGGGTGAAATATCTTTGGGACA 128211 Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730 ||| || || || || || ||||| | |||||||||||||| || || || | Sbjct 128210 TCAAGTTGTAAGTCTCTAAAACTTTAGGAATGTTATCACCGTGAATACCAATGGCAACTC 128151 Query 81731 GCAT 81734 ||| Sbjct 128150 TCAT 128147 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103 ||||| ||||| || ||||| | ||||||||||| ||||| | ||||| ||| | | | Sbjct 129858 AGATAATACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAAC 129799 Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163 || | | || ||||||| || | ||||||| ||| || || ||| || | |||| Sbjct 129798 TTACCCATGGTTGGGTTCTTCAAGTGAATGTTCAAAGATTGGGATTGATCGACGTAAGCA 129739 Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 || | || || | ||| |||||||| | |||||| | ||||||||| || || Sbjct 129738 CCTCTGTCAGCAGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGT 129686 >seq3 Length=1000385 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| | || || ||||| ||||| | || ||||| || Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | ||| | || || || || ||||| || || || || || || Sbjct 936461 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCA 936402 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||| ||||||||| | || || | | | ||| | | ||||| || Sbjct 936401 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 936342 Query 27585 TGTCCAAAAGGAATCCACT 27603 | ||||||||||||||| Sbjct 936341 CATTCAAAAGGAATCCACT 936323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309558792160