Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 154 1e-32 seq17 122 8e-23 seq40 86.0 5e-12 >seq3 Length=1000385 Score = 154 bits (170), Expect = 1e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 26980 TATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGG 27039 |||| | ||||| || ||||| || || |||| || ||| | ||||| | ||||| | Sbjct 936528 TATAGACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTG 936469 Query 27040 AACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCAC 27099 || | |||||| | ||||| | ||||| || || ||||| || ||||| || |||| Sbjct 936468 AATCTTCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCAC 936409 Query 27100 CCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCG 27159 | |||||||| | || || | ||||| || |||||||||||| || ||| | |||| Sbjct 936408 CTGATCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCG 936349 Query 27160 ATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | ||||||||||||||||| || || || || ||||||||| | ||| | ||||| || Sbjct 936348 ACTACAACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 936291 >seq17 Length=626534 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || ||| | || ||| | || || ||| | || Sbjct 620976 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCCTCT 620917 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| ||||| || ||||| || ||| Sbjct 620916 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 620857 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || || ||||||||||| || || | || || |||||| Sbjct 620856 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 620797 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| || || | || ||||||||| | ||| | ||||| Sbjct 620796 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750 >seq40 Length=167105 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095 || ||| | || ||| | ||||| | || || || || ||||| || ||||| || Sbjct 19584 GTCGAATCATCTGACACCATTGACAATGTTAAGTCCAAGATWCAAGATAAGGAAGGTATT 19643 Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155 ||||| || ||||| | || || | ||| || || ||||| ||||| || || | Sbjct 19644 CCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTG 19703 Query 27156 TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||| |||||||| || || | || ||||| ||| | ||| | ||||| Sbjct 19704 TCTGACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGTTGAGATTGAGAGGTGGT 19763 Query 27216 AT 27217 || Sbjct 19764 AT 19765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917758495360