Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 1e-32
seq17 122 8e-23
seq40 86.0 5e-12
>seq3
Length=1000385
Score = 154 bits (170), Expect = 1e-32
Identities = 177/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 26980 TATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGG 27039
|||| | ||||| || ||||| || || |||| || ||| | ||||| | ||||| |
Sbjct 936528 TATAGACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTG 936469
Query 27040 AACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCAC 27099
|| | |||||| | ||||| | ||||| || || ||||| || ||||| || ||||
Sbjct 936468 AATCTTCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCAC 936409
Query 27100 CCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCG 27159
| |||||||| | || || | ||||| || |||||||||||| || ||| | ||||
Sbjct 936408 CTGATCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCG 936349
Query 27160 ATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||||||||||||||||| || || || || ||||||||| | ||| | ||||| ||
Sbjct 936348 ACTACAACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 936291
>seq17
Length=626534
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || ||| | || || ||| | ||
Sbjct 620976 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCCTCT 620917
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || |||||||| ||||| || ||||| || |||
Sbjct 620916 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 620857
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||||||||||| || || | || || ||||||
Sbjct 620856 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 620797
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||| || || | || ||||||||| | ||| | |||||
Sbjct 620796 ATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750
>seq40
Length=167105
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095
|| ||| | || ||| | ||||| | || || || || ||||| || ||||| ||
Sbjct 19584 GTCGAATCATCTGACACCATTGACAATGTTAAGTCCAAGATWCAAGATAAGGAAGGTATT 19643
Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155
||||| || ||||| | || || | ||| || || ||||| ||||| || || |
Sbjct 19644 CCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTG 19703
Query 27156 TCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || |||||||| |||||||| || || | || ||||| ||| | ||| | |||||
Sbjct 19704 TCTGACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGTTGAGATTGAGAGGTGGT 19763
Query 27216 AT 27217
||
Sbjct 19764 AT 19765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917758495360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |