Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 7e-16
seq17 86.0 4e-12
>seq3
Length=1000385
Score = 98.7 bits (108), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||||||||| || || | ||||| || ||||| | || || ||| |
Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462
Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
|| || || ||||| ||||| || || || || |||||| | || ||
Sbjct 936461 CGACACCATTGACAAT--GTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGAT 936404
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| ||| | || || |||||||| || |||||||| |||| | | ||||||||| |||
Sbjct 936403 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTAC 936344
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||| ||||| || ||||||||| ||||||||| | ||| | || ||
Sbjct 936343 AACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294
>seq17
Length=626534
Score = 86.0 bits (94), Expect = 4e-12
Identities = 160/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845
||| |||||||||||||| || || ||||| || || || || | || ||||||
Sbjct 620980 TAAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATC 620921
Query 27846 CACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903
| | | || || ||||| ||||| || || ||||| |||||| | ||
Sbjct 620920 CTCTGACACCATTGACAAT--GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCT 620863
Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963
|| || ||| | || |||||||| || || |||||||| || | | | ||||| ||
Sbjct 620862 GACCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGAC 620803
Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| ||||| || |||| | || ||||||||| | ||| | || ||
Sbjct 620802 TACAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355861888225386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |