Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq17 150 4e-31
seq40 140 8e-28
>seq17
Length=626534
Score = 150 bits (166), Expect = 4e-31
Identities = 158/208 (76%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||| ||||| || || | | || || |||||||||| ||
Sbjct 620773 GTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 620832
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | |||||||||||| || | ||||||||||| ||||||||
Sbjct 620833 CTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 620892
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || |||||||||||| ||| ||||| | |||||| ||||| || ||
Sbjct 620893 GGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTACCTGT 620952
Query 211091 GAGAGTCTTTACAAACACCTGCATTTTA 211118
|| ||||| ||||| | ||||| |||
Sbjct 620953 AAGGGTCTTAACAAAAATTTGCATCTTA 620980
>seq40
Length=167105
Score = 140 bits (154), Expect = 8e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | ||||||||| || || ||||||||||| || || | | || || ||
Sbjct 19979 TCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACC 19920
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || ||||| || | | ||||| ||||| |||| || |||||
Sbjct 19919 ATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTT 19860
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||||||| ||| ||||| || ||||||||||| |||||| || | ||||||
Sbjct 19859 ATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGAT 19800
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | || || ||||| | |||||
Sbjct 19799 AGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 102 bits (112), Expect = 2e-16
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||| || || || ||||| ||||| || || | | || || |||||||| | ||
Sbjct 19739 GTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTG 19680
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || ||||| || | | |||||||||||| |||| |||||||| || || |||||
Sbjct 19679 CTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGWATCTT 19620
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068
|| || || || ||||||||||| ||| ||||
Sbjct 19619 GGACTTAACATTGTCAATGGTGTCAGATGATTCGACCT 19582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150247507070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |