Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq17 150 4e-31 seq40 140 8e-28 >seq17 Length=626534 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||||||||| || ||||| ||||| || || | | || || |||||||||| || Sbjct 620773 GTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTG 620832 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | | |||||||||||| || | ||||||||||| |||||||| Sbjct 620833 CTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 620892 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||||||| ||| ||||| | |||||| ||||| || || Sbjct 620893 GGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTACCTGT 620952 Query 211091 GAGAGTCTTTACAAACACCTGCATTTTA 211118 || ||||| ||||| | ||||| ||| Sbjct 620953 AAGGGTCTTAACAAAAATTTGCATCTTA 620980 >seq40 Length=167105 Score = 140 bits (154), Expect = 8e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | ||||||||| || || ||||||||||| || || | | || || || Sbjct 19979 TCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACC 19920 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || ||||| || | | ||||| ||||| |||| || ||||| Sbjct 19919 ATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTT 19860 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||||||| ||| ||||| || ||||||||||| |||||| || | |||||| Sbjct 19859 ATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGAT 19800 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | || || ||||| | ||||| Sbjct 19799 AGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 102 bits (112), Expect = 2e-16 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || ||||| ||||| || || | | || || |||||||| | || Sbjct 19739 GTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTG 19680 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | | |||||||||||| |||| |||||||| || || ||||| Sbjct 19679 CTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGWATCTT 19620 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068 || || || || ||||||||||| ||| |||| Sbjct 19619 GGACTTAACATTGTCAATGGTGTCAGATGATTCGACCT 19582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150247507070