Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq17 163 7e-35 seq40 154 4e-32 seq3 143 6e-29 seq38 98.7 2e-15 >seq17 Length=626534 Score = 163 bits (180), Expect = 7e-35 Identities = 168/220 (76%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||||||||| ||||| | ||||| || | ||||||||| || Sbjct 620761 TCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 620820 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| || || | || ||||||||| || || ||||||||||| Sbjct 620821 ATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 620880 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || |||||||| |||| ||| || || || ||||| Sbjct 620881 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGAT 620940 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717 ||||| || || | || || | || | |||||| ||| Sbjct 620941 GGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980 >seq40 Length=167105 Score = 154 bits (170), Expect = 4e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||| ||||| ||||||| ||||| || | ||| ||||| |||||||||| || Sbjct 19967 GTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTG 19908 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||| || | || ||||| || || |||||||| ||||| ||||||||||| Sbjct 19907 CTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCTTGGATCTT 19848 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | || || || |||||||| || | ||| || || || ||||| ||||| || || Sbjct 19847 TGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTCTTACCAGT 19788 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||| | || | |||||| Sbjct 19787 CAATGTTTTAACAAAGATTTGCAT 19764 Score = 134 bits (148), Expect = 3e-26 Identities = 133/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| || || ||||| ||||| | ||||| || | ||| ||||| || Sbjct 19751 TCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACC 19692 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| |||||||| || | || ||||||||| || |||||||||||||| Sbjct 19691 ATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 19632 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||| ||| || |||||||| || | ||| || | ||| Sbjct 19631 ATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGATGATTCGACCTATAA 19578 >seq3 Length=1000385 Score = 143 bits (158), Expect = 6e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | ||||||||| ||||| | ||||| |||| ||| ||||| || Sbjct 936305 TCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACC 936364 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| || || ||||| | || |||||| || || || ||||||||||| Sbjct 936365 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTT 936424 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||||| ||| ||| || |||||||| || | ||| || || || || || Sbjct 936425 ATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAAT 936484 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || ||||| || || | || | ||||||| Sbjct 936485 TGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521 >seq38 Length=199180 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || ||||| || || || |||||||||||||||||||| Sbjct 72649 GAAAATTTGACCATCGGTAATGGAAATAACGTTAGTTGGAATATAAGCAGAAACATCACC 72708 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 |||| ||||| | ||| || || || || | || |||||||| ||| Sbjct 72709 ACCTTGAGTTTCAATAACTGGCAAAGCGGTCAAAGAACCACCACCCAAA 72757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529397041892