Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq40 158 3e-33
seq3 145 2e-29
seq17 140 7e-28
seq25 107 4e-18
>seq40
Length=167105
Score = 158 bits (174), Expect = 3e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| ||| || | ||||| |||| ||| || || || |
Sbjct 19955 TTCCTTTTGGATGTTGTAGTCAGACAAR-GTTCTACCATCTTCTAATTGCTTACCAGCGA 19897
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| || || | ||||| ||| |||||||||||||| ||||||||||||| ||| |||
Sbjct 19896 AAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCTTGGATCTTTGATTTAACGT 19837
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
|||| || ||||| || | ||| ||||| | |||||| |||||||| ||||| || ||||
Sbjct 19836 TATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAA 19777
Query 283087 CGAATATCTGCAT 283099
| || || |||||
Sbjct 19776 CAAAGATTTGCAT 19764
Score = 100 bits (110), Expect = 6e-16
Identities = 110/145 (76%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||| ||||||||||||| ||| || | ||||| |||| ||| || || || |
Sbjct 19727 TTCCTTTTGRATGTTGTAGTCAGACAAR-GTTCTACCATCTTCTAATTGCTTACCAGCGA 19669
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | |||||||||| |||||||| ||||| ||||| ||||| | || ||
Sbjct 19668 AAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGWATCTTGGACTTAACAT 19609
Query 283027 TATCGATAGTGTCCGAAGCTTCGAC 283051
| || || ||||| || | ||||||
Sbjct 19608 TGTCAATGGTGTCAGATGATTCGAC 19584
>seq3
Length=1000385
Score = 145 bits (160), Expect = 2e-29
Identities = 166/219 (76%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||| ||||| ||||||||||| | |||| || | || || ||
Sbjct 936312 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTC 936370
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || |||||||||||||| | |||||| ||| || ||||| ||||| |||||
Sbjct 936371 CAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTG 936430
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| | || || | || || ||||| |||| ||| ||||| | || || |||||
Sbjct 936431 GATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATTGTCTT 936490
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTC-ATAT 283107
||| ||||| |||||||| || || |||||| || ||||
Sbjct 936491 ACCAGTCAAGGTCTTAACAAAAATTTGCATTGTCTATAT 936529
>seq17
Length=626534
Score = 140 bits (154), Expect = 7e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| || | ||| || || |||||
Sbjct 620785 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 620844
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||||| || ||||| ||||||||||||||||| | || || |
Sbjct 620845 AATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 620904
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | |||||| || | |||||| |||||||| || | ||||||||
Sbjct 620905 GTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAAC 620964
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 620965 AAAAATTTGCATCTT 620979
>seq25
Length=354343
Score = 107 bits (118), Expect = 4e-18
Identities = 179/256 (70%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|| ||| ||||| | | |||| || |||| || || | || ||||| || || |
Sbjct 309444 AACGAATTCAACAACTGGAGTGTCAGCAGCGGAACCATCAATATCGTGCTCGACGTAGAC 309503
Query 317007 AGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACT-GACCGTTCACAATCGCCCTCA 317065
|||| | | | | | ||| | |||| | | ||||| ||||||| |||| || ||||
Sbjct 309504 AGTTCT-ACATTCTTCTTGGGATGGAAAACCTTCAACTTGACCGTTAGCAATAGCTCTCA 309562
Query 317066 TCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCA 317125
||| || ||||| |||||||| || || || || | |||||| | | | ||||||
Sbjct 309563 TCAAGGTAGACTTACCAGCACCGTTAGGACCACACAAACCATATCTTCTAGCTCTCTTCA 309622
Query 317126 GATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAAT 317185
|||| |||| ||||||| | |||||| ||||||| |||| ||||||||||| |
Sbjct 309623 ATCTAAATTGGGTCTTGTTCAACAAGATCTTAGCACCATAAGCCAATGAGAACTCACAGT 309682
Query 317186 CACACAGGTCCTCGCC 317201
||||| ||| || ||
Sbjct 309683 TACACAAGTCTTCACC 309698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737617461172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |