Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 4e-25
seq40 91.5 1e-13
>seq3
Length=1000385
Score = 129 bits (142), Expect = 4e-25
Identities = 171/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| |||||| |||| ||| | ||| |||||||| |||||||| |||
Sbjct 936291 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCG 936350
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | | |||| |||| ||||| |||||||||||||| | || ||||| |
Sbjct 936351 GACAAGGTTCTAC-CGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGG 936409
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||||||||| || ||||| ||| || ||| | |||||||||| |||
Sbjct 936410 TGGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCGGAAGAT 936467
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| ||||| ||||| || || | |||||| || || ||||||||
Sbjct 936468 TCAACTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520
>seq40
Length=167105
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||| || |||| |||||| || ||||||||||||||||| || |
Sbjct 19990 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 19931
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || || | ||||| || || || || || | ||| ||||| | |
Sbjct 19930 AARGTT--CTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTG 19873
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287
| | ||| ||||| || ||||| || || || ||| | |||||||| | |||||
Sbjct 19872 GAATACCCTCCTTATCTTGGATCTT-TGATTTAACGTTATCAATGGTGTCAGATGATTCA 19814
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || ||||| || || | || || || |||||||||||
Sbjct 19813 ACTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989882288806
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |