Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 9e-14 seq1 93.3 9e-14 seq2 84.2 5e-11 >seq42 Length=34179 Score = 93.3 bits (102), Expect = 9e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118909 ATGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGGGA 118968 ||||||||| |||||||| ||||||||||| | |||||||| || ||| || ||||| Sbjct 13854 ATGGGTTATATTTGACGAGGTTCATTATATGAGAGATAAATCAAGAGGTGTAGTTTGGGA 13795 Query 118969 AGAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTTCC 119028 ||| |||| ||| | |||| |||| | | ||||||| | ||||| || |||| Sbjct 13794 AGAAACAATAATTCTTTTGCCAGATAAAGTTCATTATGTTTTTCTTTCTGCTACAATTCC 13735 Query 119029 GAACGCGGTTGAATTTTCAAATTGGTTTTCGAAA 119062 || || |||||| |||| ||| |||| ||| Sbjct 13734 TAATGCAAGAGAATTTACAAAATGGATTTCAAAA 13701 >seq1 Length=2713227 Score = 93.3 bits (102), Expect = 9e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 319807 GACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCT 319866 || || || | ||| ||||| || ||| | ||| | || |||| ||| || || || Sbjct 787009 GATCCATCAATATCATGTTCAACATAAACTGTTCTTAATTCATCTTGAGATGGAAATCCA 787068 Query 319867 TCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCA 319926 |||| | || | |||| || | ||| || ||||||||||| || || ||||| ||| Sbjct 787069 TCAACTTTTCCATCAGCAATTGCTCTCATAAGAGTTGATTTACCTGCACCATTTGGACCA 787128 Query 319927 CACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTT 319986 || | ||| || | | || | ||| || ||| | || || || | | |||||| Sbjct 787129 CATAAACCATATCTTCTACCTCTTTTAAGACGGAATTGAGTATTATTTAATAAAATTTTG 787188 Query 319987 CCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 |||||||||| | |||||||||||||| ||| | ||| || || Sbjct 787189 GCACCATATGCTAAAGAAAATTCACAATTACATAAATCTTCTCC 787232 >seq2 Length=2503681 Score = 84.2 bits (92), Expect = 5e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118909 ATGGGTTATTTTTGACGAAGTTCATTATATCAATGATAAATCCAGGGGTTCTGTATGGGA 118968 ||||||| | ||||| || ||||||||||| | |||||||| || ||| || ||||| Sbjct 117598 ATGGGTTGTATTTGATGAGGTTCATTATATGAGAGATAAATCAAGAGGTGTAGTCTGGGA 117539 Query 118969 AGAGTCAATCATTTTGATGCCGGATACGATGCGCGCTGtttttttGTCTGCAACGGTTCC 119028 ||| |||| ||| | |||| |||| | | ||||||| | ||||| || |||| Sbjct 117538 AGAAACAATAATTCTTTTGCCAGATAAAGTTCATTATGTTTTTCTTTCTGCTACAATTCC 117479 Query 119029 GAACGCGGTTGAATTTTCAAATTGGTTTTCGAAA 119062 || || |||||| |||| ||| |||| ||| Sbjct 117478 TAATGCAAGAGAATTTACAAAATGGATTTCAAAA 117445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823037710730