Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 259 5e-64 >seq15 Length=386167 Score = 259 bits (286), Expect = 5e-64 Identities = 603/894 (67%), Gaps = 19/894 (2%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| || | |||||| ||||| |||||||| || ||| Sbjct 129432 AACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAA 129373 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781 ||| ||||| ||||| |||||||| ||||| ||| | | | || ||||| | |||| | Sbjct 129372 AGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACCTAA 129313 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 | | | ||||||||| || |||||||| | |||||| |||||||||| || |||| Sbjct 129312 AG-CAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCA 129254 Query 16842 TTCCTAT--AAGACGTACCGGAAGAGCTTCCGTCAAA-AATCGTTGCTCTATAACAACCG 16898 | |||| |||| | | || | ||| || || ||| |||| || || ||| |||| | Sbjct 129253 TACCTAATAAAGAAGCA--GGTAAAGCATCAGTAAAATAATCTTTT-TCAATATCAACAG 129197 Query 16899 CTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GGTGTATGTTTAAGATGTTTAAA 16956 |||| ||||||| | ||| || | ||| ||| ||| | | ||| ||| Sbjct 129196 CTTCAGTAATAATTTTTTGAACAA-TTAAT-GGATTTGGTTTATTAATTAAATGAGAAAA 129139 Query 16957 CATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAA 17016 | | ||| || ||||| ||| | || || ||||| | || | ||| || ||||| Sbjct 129138 TAATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAA 129079 Query 17017 TGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGA 17076 ||| || || ||||| |||| ||| |||||||||||||| | || || || ||||| Sbjct 129078 TGTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGA 129019 Query 17077 AAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTT 17136 ||||| ||||| || || | ||||| || | ||||| ||| || || || || || Sbjct 129018 GAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATT 128959 Query 17137 GTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTAT 17196 | | ||||||| | |||| || |||||||| || || || || ||||| || Sbjct 128958 ATCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAAT 128899 Query 17197 GGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCT 17256 || |||||||| | ||||| | | | || | ||||| ||||| | | || Sbjct 128898 TGCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGA 128839 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 || |||| || || || || ||||| || ||||| || ||||| ||| ||||| Sbjct 128838 ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTC 128779 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | ||||||||||| | | || ||| ||| |||||| || || || || || Sbjct 128778 AGGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGA 128719 Query 17377 CGCGGCGAAAAACGCCAATATATGCTT--AATGAAATATTTTTC-GTCCGGTGTAA--GA 17431 || || ||||| || | | | ||| ||| ||| || |||| | | ||| || Sbjct 128718 AGCTGCAAAAAATGCTA--AAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGA 128661 Query 17432 ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491 ||| || | ||||||||| || ||| | |||||| | |||||||| ||| Sbjct 128660 TTATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCT 128601 Query 17492 ACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 | || ||||||||||| | |||||| |||| |||| || || |||| |||| Sbjct 128600 TCAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACA 128547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545140678280