Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq15 343 2e-89 >seq15 Length=386167 Score = 343 bits (380), Expect = 2e-89 Identities = 613/886 (69%), Gaps = 13/886 (1%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| |||||| || | |||||| || || |||||||| || |||| Sbjct 129432 AACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAA 129373 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019 ||| |||||||||||||||||||| ||||| ||| | | | || || || | |||| | Sbjct 129372 AGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACCTAA 129313 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 ||| |||||||||||| |||||||| | ||||||||||||||| | ||||| | Sbjct 129312 AGCAACTAA-TAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCA 129254 Query 16080 TTCCTAT--AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGC 16137 | |||| ||| | | || | ||| | || ||| | | || ||| || |||| || Sbjct 129253 TACCTAATAAAGAAGCA--GGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGC 129196 Query 16138 TTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACAT 16197 ||| |||| || | | | | | ||| ||| ||| || ||| | Sbjct 129195 TTCAGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAATAA 129136 Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257 || ||| || || || ||| || ||||| ||||| | || | ||| || ||||| || Sbjct 129135 TAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGT 129076 Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317 ||| ||||||||| |||| ||| |||||||| ||||| | |||||| || || || || Sbjct 129075 TAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAA 129016 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 ||| ||||| ||||||| |||||||| | ||||| ||| || || |||||| |||| Sbjct 129015 GAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTATC 128956 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | ||||||| | ||||||| ||||||||||| ||||| || ||||| || || Sbjct 128955 ATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGC 128896 Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497 ||||| || | ||||| | ||| | ||||| ||||| | | |||| || Sbjct 128895 ATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATA 128836 Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557 |||| || || || || || || || ||||| ||||| || ||| ||| || | Sbjct 128835 AGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGG 128776 Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 ||||| ||||| | |||| ||| | | || ||||| || ||||| ||| || Sbjct 128775 AATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGC 128716 Query 16618 AGCAAAAAACGCCAATATGTGCTT--AATGAAATATTTTTC-GTCAGATGTAA--GAATA 16672 |||||||| || || | ||| ||| ||| || |||| | || ||| || || Sbjct 128715 TGCAAAAAATGCTAAAA--CTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTA 128658 Query 16673 TGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACT 16732 | |||||| | ||||||||| || ||| | |||||||| |||||||| ||| | Sbjct 128657 TTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCA 128598 Query 16733 GCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 || ||||||||||||| |||||| |||| |||| || ||||||| Sbjct 128597 GCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATA 128552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413946119720