Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 129 4e-25 >seq2 Length=2503681 Score = 129 bits (142), Expect = 4e-25 Identities = 278/407 (68%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 |||||||||||| || | ||||||||| || || ||||||| | || || | | Sbjct 1553604 ACATAAAATTGAGAAAAAATATGACAAGGAGGTAAAGCCATTTTTGAAAAATCAGCAGGG 1553545 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAG--TATCAATCA 101984 |||||||| |||| | || |||| ||| || || ||| | ||| || | | ||| | Sbjct 1553544 TTCCAAGCTGACATGATTATTCTTCGATCA-TATGGATTGGTCTTA-AGCTTTTTAATAA 1553487 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACA-CCTTTATATTCT 102043 | | || || || || || | ||| | ||||| || ||| |||| ||||| Sbjct 1553486 CTTCTGCCAACTGATCCACACCCTTTCCATCATAATTT-GCATCACAGCCTTCATATTTC 1553428 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || ||||| ||||| ||||| ||||||||||| |||||||| ||| | ||| | || Sbjct 1553427 GCACCAAAATGTCTCCATTGAAACCCATACACAGGACCAAGATCACCTAC-TCTGTTTCC 1553369 Query 102104 T-AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | |||||| | ||||| |||||| ||||||| || | || || Sbjct 1553368 TGTAAGTCCCACCGAATCTAAGTACTCCCTAGAGCCATTCCCATCCCATATTTTAACTCC 1553309 Query 102163 AGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAAC 102222 | | || || | | || ||| |||| || || |||||||| | ||| | || Sbjct 1553308 TTTTTCAGAAAGTTTAGCACCATCTGTACATCCGCTTATGAACCACAATAATTCATGAAT 1553249 Query 102223 AACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCAT 102269 || | || | |||||||||| ||||| ||||| | ||||||| ||| Sbjct 1553248 AATAGCTTTTAAAAATACTCTTTTAGTTGTTAATAATGGAAATACAT 1553202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250887404821