Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15 462 3e-125 seq3 459 3e-124 >seq15 Length=386167 Score = 462 bits (512), Expect = 3e-125 Identities = 643/896 (72%), Gaps = 10/896 (1%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 || |||||| || |||||| || ||| || | |||||| ||||||||||||||||| Sbjct 129438 AGCCATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACC 129379 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAA 23947 |||| || ||||||||||| ||||| ||||||| ||||||||||| | | ||||| Sbjct 129378 AGCTAAAGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATT 129319 Query 23948 TCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACA 24007 || || || | ||||||||||| ||||| || | |||| ||| | || ||| Sbjct 129318 ACCTAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACA 129259 Query 24008 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 24067 |||||| |||| | | | || | ||| |||||| | | |||| ||||||| || Sbjct 129258 ATTCATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAAC 129199 Query 24068 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 24127 || || || ||||| | || || | | | ||| || | |||||| ||| Sbjct 129198 AGCTTCAGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAA 129139 Query 24128 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 24187 | ||||| || ||||| || ||||| || ||||||| ||||||||| || ||||| Sbjct 129138 TAATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAA 129079 Query 24188 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 24247 || | || ||||||| || | ||||| | ||||||||| || ||||| |||||||| Sbjct 129078 TGTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGA 129019 Query 24248 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCT 24304 |||||||| ||||| || || ||||| |||| | |||||| |||| | | | | Sbjct 129018 GAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATT 128959 Query 24305 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 24364 |||| ||||| || |||||| || || || | ||| | ||| || ||||| || || Sbjct 128958 ATCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAAT 128899 Query 24365 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGA 24422 |||||||| | | | || ||||| || |||||||| ||| ||||| ||| | ||||| Sbjct 128898 TGCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGA 128839 Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 ||| |||| |||||||| ||||| || |||||||| || || |||||| |||| Sbjct 128838 --ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCT 128781 Query 24483 TCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 24542 || | ||| || |||||| | |||| ||| ||||||||||||| || || || ||| Sbjct 128780 TCAGGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCA 128721 Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GT 24599 ||||||||||| || || || | |||||| || |||| | | ||| | Sbjct 128720 GAAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGA 128661 Query 24600 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 24659 ||||||||||||| | ||||||| || ||| | |||||| | ||||||||||| || Sbjct 128660 TTATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCT 128601 Query 24660 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || || ||||||||||| | ||| || |||||||||| ||||||||| | |||||| Sbjct 128600 TCAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 >seq3 Length=2066014 Score = 459 bits (508), Expect = 3e-124 Identities = 1479/2280 (65%), Gaps = 49/2280 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 || || ||||| | || || || | || || | || ||||||||| || ||||| | | Sbjct 1413378 GTAAACTGAATAGCTGCTGAGGCTGCTTGAGTTCTTAAATAGTACATACCAGTTTTCAAA 1413437 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAG-TTTGGAATAACTCGGATCTGCTAT 52926 || |||| || || ||||||||||| || | ||| || | ||| || || Sbjct 1413438 CCTTTTTTCCAACCATAGAAATGCATACTAGTCAACTTTCCCATTGTT-GGAGCTCTTAA 1413496 Query 52927 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 52986 ||| ||||| | |||||| |||||||||||| || ||||| || || | ||| | | Sbjct 1413497 ATGAATATTTAATGATTGAGATTGATCGATGAAAGCACCCCTATCGGCTGACATATCAAC 1413556 Query 52987 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 53045 || || ||||| | | |||||| | || || || || || | | | |||| ||||| Sbjct 1413557 AATAGTTTTTTGAGAGAGTTCCCAGACTGTCTTGTATAAATCTTTAATTTTCTT-TGGAA 1413615 Query 53046 GGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 53102 ||||| | ||||| || || || | ||||| | ||| || ||| | Sbjct 1413616 TGTTTGGCAAGTGTTGAATTGAACCGTTATTTGAAATAATTGACTCCTTCATTGCATTAG 1413675 Query 53103 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 53162 ||||| | | |||| | | | | || |||||||||| |||||| || | Sbjct 1413676 ACCATAGACCCATTGCCACTAAATCCTTTAACAAATATGGATTAACTATTTGAAACTCAC 1413735 Query 53163 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 53222 | | ||| || | || | ||||||||| |||||| ||||| | | || |||| | Sbjct 1413736 CTGCCAAAACACGACGCGAATAAATATTAGAGGTATAAGGTTCAAAGCATTCGTTATAAC 1413795 Query 53223 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 53282 | | |||||||| |||||| ||||| |||||||| || || |||||| |||||| | || Sbjct 1413796 CAAGAATTTGAGAAGTTGAAGCAGTTGGCATAGGAGCGACTAATAAAGAATTTCTTAAAC 1413855 Query 53283 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 53342 | | | |||| | ||| |||||| ||| | | ||| | | || ||| Sbjct 1413856 CATGTTTTCTAACTTTTGCTTTTAATTCTTCGTAGTCCCATAATTGAGAAGGTTTTCTTT 1413915 Query 53343 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 53402 |||| |||||| ||| || |||||| ||| || || |||| Sbjct 1413916 CCCAAAGGTCAGGCTGTAAAATACCTTTAGATGCAGGAGATCCTGAATAGGTTTCATATG 1413975 Query 53403 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGA 53462 ||| | ||| |||||| | || || | |||| ||| |||||| ||||||| Sbjct 1413976 TTCCCAATTCAGAAGCAAGTTCAGTAGAAGCTTCAACTGCAGCGTGATAAATTGTTTCGA 1414035 Query 53463 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTAAGAGAATA 53521 | || | |||| | | || ||||| |||||| || |||| |||| | ||| Sbjct 1414036 AAATTTGAATATTCAAAATTTTAGCTTCTGAAGAATCAAAAGG-TAATCTTAACATCATA 1414094 Query 53522 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATT 53581 || | |||||||| ||||||||||| | | | || || |||| | || ||||||| || Sbjct 1414095 AATGTATCTGCTAAACCTTGAACACCTAAAGCAATTGGCCTATTTTTCATATTAGATCTT 1414154 Query 53582 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATT 53641 | |||||||||| |||||| | ||| ||| |||| || || ||||| | Sbjct 1414155 TTTGCTTCTGGAACTGGATAAAAGTTACGATCAATAACGCGATCAAGATTTCTTGTTAAA 1414214 Query 53642 ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---------TGTCCATCTATTACA 53692 |||||| | | || | || ||| ||||||| | || ||||| | | Sbjct 1414215 ACTTTGGCTATTTCATGCAATTTATCAAAATCATACCAACAACTATGATCATCTTGTTGA 1414274 Query 53693 A-ACATGTTCAATG--CAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 53749 | | ||| | | | ||| ||| || | ||||||||| || || | ||||| | | Sbjct 1414275 ACAAATGCTGGAAGGGCAAGAGAAGCTAAATTACAAACAGCAGTTTCTTGGGCATCTGAA 1414334 Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 || | | ||| ||| |||||||||| | | ||||| || | ||| | ||||||| Sbjct 1414335 TACTCAACTATTTCACAGCAAAGATTAGAAGATTTGATCACACCAAGATTCTTTTGATTA 1414394 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869 || ||||| || || ||||| ||||||| ||||| || ||||| | |||| | || | | Sbjct 1414395 CTTTTTTTATTGCAAGCATCTTTATAAACCATGAAAGGAGTACCGGATTCAGTTTGAGCT 1414454 Query 53870 TCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT 53929 |||| ||| || ||| | |||| |||| | | || ||| |||| | || Sbjct 1414455 TCTAAAATTGCAGACCATAACTTTTGAGC-TTTAACA---ACTTTTATAGCTTTCCCATT 1414510 Query 53930 TCGTATAGTGTATACAA----TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGG 53985 | | | | || ||| | |||||| || ||||| || || || ||||| Sbjct 1414511 TTTTTCATAGGATTCAAATAGTTTTTCAAATTCATCTCCATAACAATCACTTAAACCAGG 1414570 Query 53986 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 54045 | ||||| ||| | | || | ||| || || | | |||| ||||||||| | Sbjct 1414571 AACTTCATTTGGAGAAAATAATGGCCAATCAAGGTTTTTTTCAACTCTTTTCATAAATAA 1414630 Query 54046 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105 ||| || ||||||||||| ||||| |||||| | |||| || || || || ||| Sbjct 1414631 ATCCGGGATCCAAAGAGCAGGAAATAAATCTCTTGCTCTAATCTCTTCTTTACCATGATT 1414690 Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165 ||| ||| ||| | || | | ||| |||| |||||| ||||| | || || | | Sbjct 1414691 TTTTCTAATATCAATAAAATCAAAAATGTCAGCATGCCATGGTTCAAGATAGATTGCAAA 1414750 Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225 | ||||| ||||| || || || ||||| | ||||| || || |||| | ||||| Sbjct 1414751 GGCACCAGGACGTTTATTACCACCTTGATCAACATATCTTGCAGTCATATTGAATACTCT 1414810 Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285 |||||||| |||||||||||||| | |||||| || || | ||||| || | || Sbjct 1414811 TAACATTGGGATAATACCATTGGAAGTACCATTAGTACCTGCAATATATGAACCGGTTGC 1414870 Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345 | |||||| ||| || |||||| || || || ||| || | ||| | ||| Sbjct 1414871 TCTGATATTATGAATATGTAAACCTATACCACCAGCATGTTTTGA-AATAACGGCCAT-- 1414927 Query 54346 TT---TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 54402 || || ||||| | || || | ||| ||||||| |||| || |||||||| Sbjct 1414928 TTCAGACAAAGTATCGAATATACCATTTATTGAATCATCCTTCATTGCAACAAGAAAACA 1414987 Query 54403 GCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 ||||||||| || || |||||| ||||| ||||| || |||||||| || | Sbjct 1414988 AGAAGACATTTG----CGGCTTTGGAGTTCCAGCATTGAATAATGTTGGAGAAGCATGAG 1415043 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGAT 54518 | || ||||| ||| | || ||| || || || | | | || |||| || Sbjct 1415044 TGAAATATTTTAGAGACATTAAATTATAAGTTTCAAGAACACGCTCGATATTATCACCAT 1415103 Query 54519 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 54578 |||| || || || || | ||| | || || ||||||||||| | | || || | Sbjct 1415104 GAATACCAACCGCAACTCTCATAATCAAATGTTGAGGTCTTTCGGCCACTTTACCATTAA 1415163 Query 54579 TTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 54636 || | | || || ||| |||| | ||||||||| |||||| | || || ||||| || Sbjct 1415164 TTCTTAATAAATAAGATCTTTCAAGAGTTTTAAAGCCAAAAAAATTATAGTTGAAA--TC 1415221 Query 54637 TCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT-GG 54695 || || |||| || | ||||| || | || || ||| | || || | || | Sbjct 1415222 ACGATCATAAACGATTGCAGAGTTAAGCTCTTCAGAATGTTTCATTAC-ACTTTTATAAG 1415280 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 || | || || ||||||| ||||| | |||| || || ||||| ||| | | || Sbjct 1415281 TATCATCAGATATCATCGGAGCATGTTGGTCTGTTTTTGGGTTAACATAATTATAAAGAT 1415340 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 | || || | |||| |||| ||||||| || |||| || || | ||||||| Sbjct 1415341 CTGAAATAACAGCCGAAAATTGTTTCTTTGTTTGCTTATGTAAGTTAGAAATAGCTATTC 1415400 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTG 54875 | || || | ||| |||||||| ||||| ||||| | || || |||| || | Sbjct 1415401 TGGCAGCCAAAATAGCATAATCAGGATGAACAGTAGTCATATAAGCAGCAGTTTCAGCAG 1415460 Query 54876 TCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAG 54935 ||| | |||||||| | || || || |||| ||| | || ||||| | || Sbjct 1415461 CAAGATTATCCAATTCAGCAGTAGTGACACCATGATAAACACCGGATATAACTCTTTGAG 1415520 Query 54936 CTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAG 54995 ||||||| || ||| | ||||| | | |||||||||||| | | | || | || Sbjct 1415521 TAATTTTAACAGCATCGACATGATTCGAATCTAAGCCATAACAAAGTCGTGAAACTCTAG 1415580 Query 54996 ATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTT 55055 || |||||||| || || | ||| || ||||| || |||| |||||||||| Sbjct 1415581 CAGTTATTTTATCGAAACGAACTTGTTCTTTTCGTCCATCTCTTTTATAAACAAACATTT 1415640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721073072080