Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 152 4e-32 >seq2 Length=2503681 Score = 152 bits (168), Expect = 4e-32 Identities = 284/405 (70%), Gaps = 14/405 (3%) Strand=Plus/Minus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290 |||||||| ||| || | |||||| || || || |||||||||| || ||| || || Sbjct 1553604 ACATAAAATTGAGAAAAAATATGACAAGGAGGTAAAGCCATTTTTGAAAAATC--AG-CA 1553548 Query 97291 ---TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATT 97347 |||||||| |||| | ||||||| ||| ||| || || | || | | || | | Sbjct 1553547 GGGTTCCAAGCTGACATGATTATTCTTCGATCATATGGATTGGTCT-TAAGCTTTTTAAT 1553489 Query 97348 ATCTGCTTT-AATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGA-CCTTGATATT 97405 | || || || ||||| || || | |||| ||||||| ||| | | | |||| ||||| Sbjct 1553488 AACTTCTGCCAACTGATCCACACCCTTTCCATCATAATT-TGCATCACAGCCTTCATATT 1553430 Query 97406 CTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTAT 97465 || |||||||| |||||||| || ||||| ||||| ||||| || ||| || || | | Sbjct 1553429 TCGCACCAAAATGTCTCCATTGAAACCCATACACAGGACCAAGATCACCTACT-CTGTTT 1553371 Query 97466 CACAGAAA--CCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC 97523 | | | || || | | |||||| || |||||| ||||| ||||||| || | || Sbjct 1553370 C-CTGTAAGTCCCACCGAATCTAAGTACTCCCTAGAGCCATTCCCATCCCATATTTTAAC 1553312 Query 97524 ACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTC 97583 || | | | ||| | | || ||| |||| || || |||||||| ||||| | Sbjct 1553311 TCCTTTTTCAGAAAGTTTAGCACCATCTGTACATCCGCTTATGAACCACAATAATTCATG 1553252 Query 97584 CACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | || | || | |||||||||| ||||||||||| | ||||| Sbjct 1553251 AATAATAGCTTTTAAAAATACTCTTTTAGTTGTTAATAATGGAAA 1553207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783699923470