Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq10 230 4e-55 seq4 208 1e-48 seq1 199 6e-46 seq8 178 2e-39 seq2 95.1 2e-14 >seq10 Length=718177 Score = 230 bits (254), Expect = 4e-55 Identities = 193/237 (81%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || ||||||| ||||| || ||| |||| ||||| | Sbjct 468213 AATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATCTTC 468154 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| |||| | ||| ||||||||||||||||||||||| ||||| ||||| Sbjct 468153 TGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCA 468094 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| || ||||||||||| ||| || |||||||| |||||||| Sbjct 468093 ACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTATAA 468034 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||||||||||||||||||||| ||||| |||||| | ||| |||||||| |||||| Sbjct 468033 TATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGTGGTAAAAA 467977 >seq4 Length=1551466 Score = 208 bits (230), Expect = 1e-48 Identities = 191/239 (80%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || |||| || ||||| || || | || ||||| || | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| ||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCA-AAAATTCAAGATAAAGAAGGAATTCCACCAGATCA 1333437 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| |||||||||||||| ||| || |||| ||| |||||||| Sbjct 1333436 ACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAA 1333377 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||||| | ||||| |||||| | ||| |||||||||| ||| || Sbjct 1333376 TATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGTATGCAAATTT 1333318 Score = 179 bits (198), Expect = 6e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || | ||||| ||||| || ||| |||| ||||| || | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | || || |||||||||||||||||||| || ||||||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| |||||||||||||| ||| || |||| ||| ||||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 ||||||||||| || || | ||||| ||| | | ||| |||| |||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGTA 1333099 Score = 168 bits (186), Expect = 1e-36 Identities = 183/240 (76%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | ||||| |||| || ||||| || ||| |||| ||||| || Sbjct 1334012 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCATC 1333953 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 |||||||||| |||| ||||| || || || |||||||||||||| || ||||| |||| Sbjct 1333952 TGATACAATTGATAATGTTAAATCA-AAGATCCAAGATAAAGAAGGAATTCCACCAGATC 1333894 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 ||||| | | || || || || || |||||||| ||| || |||| ||| || || | Sbjct 1333893 AACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACA 1333834 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | |||||||||||||||||| | ||||| || ||| | | |||||||||| ||| || Sbjct 1333833 ACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGGTATGCAAATTT 1333774 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| |||| || || || || ||| |||| | ||| | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | ||| ||||||||||||||||||||||| || || || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || ||||||||||| || || |||| || || |||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||||||| | ||||| ||| | | ||| |||||||||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGGTAT 1333554 >seq1 Length=2713227 Score = 199 bits (220), Expect = 6e-46 Identities = 178/223 (80%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607 ||| | || || || ||||| |||||||| ||| |||| | ||| | |||||| ||| Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667 |||| | ||| ||||||||||||||||||||||| ||||| ||||||||||| | Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727 || ||||| || ||||||||||| ||| | |||| ||| |||||||| ||||||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||||||||| ||||| |||||| | ||| |||||||||||| Sbjct 1439248 GAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGTATTA 1439206 >seq8 Length=720923 Score = 178 bits (196), Expect = 2e-39 Identities = 181/235 (77%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 |||| ||| ||||| ||| | || || |||| || |||||||| ||| |||| ||||| Sbjct 254921 AATATAAT-CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAA 254863 Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652 | |||||| ||| ||| | ||| ||||| |||||||||||||||| ||||| Sbjct 254862 TCCTCTGATACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCA 254803 Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712 ||||||||| | | |||||||| || ||||||||||| ||| | |||| ||| ||| Sbjct 254802 GATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGAT 254743 Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 |||||||||||||||||||||||| | ||||| ||| | | ||| |||| |||| Sbjct 254742 TATAATATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGTA 254688 >seq2 Length=2503681 Score = 95.1 bits (104), Expect = 2e-14 Identities = 273/414 (66%), Gaps = 12/414 (3%) Strand=Plus/Minus Query 205559 TTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAG 205618 |||||| |||||| |||| ||||||||| |||| | |||| ||| || ||| || Sbjct 1553606 TTACATAAAATTGAGAAAAAATATGACAAGGAGGTAAAGCCATTTTTGAAAAATCAGCAG 1553547 Query 205619 GATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAA 205678 | ||||| |||| | ||||| ||| | | || || | || | || || |||| Sbjct 1553546 GGTTCCAAGCTGACATGATTATTCTTCGATCATATGGATTGGTCTTAAGCTTTTTAATAA 1553487 Query 205679 TATGTGTTAATTGATCAA-ATCCTTGATTTGTATAATTTGTATCCATATCAAT-ATATTT 205736 | || || ||||| | | |||| | |||||||| ||| | | | | |||||| Sbjct 1553486 CTTCTGCCAACTGATCCACACCCTTTCCATC-ATAATTTGCATC-ACAGCCTTCATATTT 1553429 Query 205737 AGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATC 205796 ||||||||||| | ||||||||| ||||| || ||||| | ||||||| || | | | Sbjct 1553428 CGCACCAAAATGTCTCCATTGAAACCCATACACAGGACCAAGATCACCTACTCTGTTTCC 1553369 Query 205797 ATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattcc 205856 ||| || | || || | || ||||| ||||||| || | | ||| Sbjct 1553368 TGTAAGTCCCACCGAATCTAAGTACTCCCTAGAGCCATTCCCATCCCATATTTTAACTCC 1553309 Query 205857 tttattttttaGAATATTT----GTATTAGTTGATCCAGATATAAACCATAATAATTCTT 205912 ||||| |||| ||| || || |||| ||| ||||| |||||||| | Sbjct 1553308 ----TTTTTCAGAAAGTTTAGCACCATCTGTACATCCGCTTATGAACCACAATAATTCAT 1553253 Query 205913 CAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAATGAATCAT 205966 || ||| || | |||| | | ||| ||||| |||||||||||| ||||| Sbjct 1553252 GAATAATAGCTTTTAAAAATACTCTTTTAGTTGTTAATAATGGAAATACATCAT 1553199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455329532800