Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq15 486 2e-132 >seq15 Length=386167 Score = 486 bits (538), Expect = 2e-132 Identities = 641/885 (72%), Gaps = 19/885 (2%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| ||| ||||| |||||||| ||||| ||||| || |||| |||||||| Sbjct 129423 TTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAATATT 129364 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGCATCCCAATTCCAAC 16060 ||||||||||||||| |||||| | |||| ||| |||| | || || | | Sbjct 129363 TTCCATAAAATCAAATGGATTTGT--AACATTATAAAATTTTTTATTACCTAAAGCAACT 129306 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 ||||||||||| || |||||||| | ||| || |||||| | ||| ||||| |||| | Sbjct 129305 AATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAAT 129246 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 || | |||| | || || || ||| ||| |||||| |||| ||| |||||| | || Sbjct 129245 AAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTAATA 129186 Query 16181 ATATCTCTTACTACACTATTTAACGGAG--GGTTTAATAAGTGTTT----AAACATTATA 16234 || | | || | |||| ||| |||||| ||| | | ||| | || | Sbjct 129185 ATTTTTTGAACAA------TTAATGGATTTGGTTTATTAATTAAATGAGAAAATAATAAA 129132 Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||||||| ||| | ||||| || |||| ||||| || ||||||||||| | | Sbjct 129131 CAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAAA 129072 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 |||||||||| |||| |||||| | ||||||||| | ||||| || ||||| ||||| Sbjct 129071 CCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAAA 129012 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 ||||||||||| || ||||| ||||| |||| ||| | || || ||| | Sbjct 129011 ATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTATCATTA 128952 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| || |||||| | ||||||||||||| ||| || | || ||||||||| Sbjct 128951 ATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCATTA 128892 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 |||||| | || |||||||| |||| |||||||||||||| || |||| ||| || Sbjct 128891 AATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATAAGTT 128832 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || ||||||||||| ||||| || |||||||||||||| ||| ||||||| | ||| Sbjct 128831 TCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGGAATT 128772 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | |||| |||| |||| ||||| ||||| || ||||| ||||||| Sbjct 128771 TGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGCTGCA 128712 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttC---GTTATCTGAAAGTTTTAACCAG 16711 ||||| || | | | ||||||| | |||| |||| | || | || ||| Sbjct 128711 AAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTATTCCAA 128652 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771 ||| |||||||| |||||| | |||||| |||||||||| ||||| |||| ||| Sbjct 128651 TCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCTTTT 128592 Query 16772 TTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816 |||||||||| ||| || || | || ||| ||||| | |||| Sbjct 128591 TTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACA 128547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511589520600