Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq15 504 7e-138 >seq15 Length=386167 Score = 504 bits (558), Expect = 7e-138 Identities = 655/895 (73%), Gaps = 13/895 (1%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || ||||||||| ||| |||||||||||||| || ||||||||||| | Sbjct 129434 ATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCT 129375 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 | || ||||||||||||||||||||||||||||| |||| | | | ||| | | ||| Sbjct 129374 AAAGAAATATTTTCCATAAAATCAAATGGATTTGTA-ACATTATAAAATTTTTTATTACC 129316 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 || | | || ||||||||| |||| || |||| ||||||| ||||||| | |||||| Sbjct 129315 TAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATT 129256 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||||| || |||| | || || ||| | |||||||| ||| ||||| Sbjct 129255 CATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGC 129196 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAAA 14197 || | ||||| | || |||| | | || | |||| ||| ||| ||| Sbjct 129195 TTCAGTAATAATTTTTTGAACAATT--AATGGATTTGGTTTATTAATTAAATGAGAAAAT 129138 Query 14198 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 14257 | |||||| ||||||||| |||||| || |||||||||| ||| | ||| ||||||||| Sbjct 129137 AATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAAT 129078 Query 14258 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 14317 ||||| |||||||| || |||| |||||||||||||||||||| ||| || ||||| || Sbjct 129077 GTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAG 129018 Query 14318 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14377 ||||| || || ||||| |||||||| || | ||||| ||| || | | || | || Sbjct 129017 AAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTA 128958 Query 14378 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14437 | |||||| || ||||||||||| ||||| ||||||| | ||||||||||| Sbjct 128957 TCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATT 128898 Query 14438 GCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATC-AATAAGTAAGCT 14496 |||||||||||| || || ||||| | | | ||| || ||||| ||||| ||| Sbjct 128897 GCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGA- 128839 Query 14497 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556 ||| ||||||| || || |||||||| || |||||||||||||||||| ||||||| Sbjct 128838 ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTC 128779 Query 14557 TGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 | ||| || |||| || ||||| |||| | |||||||||||||| ||||||||| Sbjct 128778 AGGAATTTGAACTTCTGCAGAAAAAT-TTTCAACTAAATTTTCATTAACAATACCATCAG 128720 Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTT 14672 ||||||||||||||| || | || |||||| | || | || ||| | | Sbjct 128719 AAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGAT 128660 Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732 | |||||||| |||||| ||| | ||| | ||| || | |||||||| ||| Sbjct 128659 TATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTT 128600 Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 ||||||||||||||||| ||| ||||| | |||| || ||||| | ||||| Sbjct 128599 CAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345171918280