Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq10 107 1e-18 seq4 96.9 3e-15 seq8 89.7 4e-13 >seq10 Length=718177 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 ||||||||||||||||| || || || | | |||| ||| |||||| |||||||| || Sbjct 468016 GTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCTTCTAATTGTTTACCA 468075 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| | || | |||||||||||| || | ||||| ||||| ||||| || Sbjct 468076 GCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTACTTTTA 468135 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||| ||| | || ||| | || || |||| || || || ||| Sbjct 468136 ACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCTGTTAAGGTT 468195 Query 18309 TTTACAAAAATTTGCATTTTTAAA 18332 || ||||||||||||||||||||| Sbjct 468196 TTAACAAAAATTTGCATTTTTAAA 468219 >seq4 Length=1551466 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| ||||||||||||||||| || || || | | ||| ||| |||||| |||||| Sbjct 1333353 TGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCTAATTGT 1333412 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| | || | | ||||||||| || | ||||| ||||| ||||| | Sbjct 1333413 TTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTT 1333472 Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302 || || | ||| ||| ||| | || ||| | ||| ||| |||| || || Sbjct 1333473 GATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTTTTACCAGTT 1333532 Query 18303 AATGTTTTTACAAAAATTTGCAT 18325 || ||||| ||||| |||||||| Sbjct 1333533 AAAGTTTTAACAAAGATTTGCAT 1333555 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | |||||||| || ||||||||||| || || || | Sbjct 1333101 CCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGAT 1333160 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| |||||| |||||||| || ||| | || | | ||||||||| || Sbjct 1333161 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGA 1333220 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| ||||| ||| | ||| || | ||| ||| ||| | || | Sbjct 1333221 ATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACT 1333280 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || |||| || ||||| ||||| |||||||||||||| Sbjct 1333281 TCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| |||||||||||||||||||||||||| | | ||| ||| |||||| ||||| Sbjct 1333809 TGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGC 1333868 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GGCAATTT 18240 || || || |||| | | ||||||||| || | ||||| ||||| || ||| Sbjct 1333869 TTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGGATCTTT 1333928 Query 18241 GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300 | | || || | ||| || ||| | || ||| | || ||| |||| || | Sbjct 1333929 GAT--TTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGTTTTACCAG 1333986 Query 18301 TCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 | || || || || |||||||||||||| ||| Sbjct 1333987 TTAAAGTCTTGACGAAAATTTGCATTTTGAAA 1334018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| || | ||||| ||||||||||||||||| || ||||| | | Sbjct 1333557 CCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGAC 1333616 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| ||||| |||||||| || ||| | || | | |||||| || || Sbjct 1333617 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGA 1333676 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| ||||| ||||| ||||| | ||| ||| || | || | Sbjct 1333677 ATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACT 1333736 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| | || || || || || || |||||||||||||| Sbjct 1333737 TCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq8 Length=720923 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || |||||| || | ||||| ||||||||||||||||| || || || | Sbjct 254690 CCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 254749 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | |||||| |||||||| || ||| | || | | ||||||||| || Sbjct 254750 AAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 254809 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| ||||| |||| || || | ||| ||| ||| || || | Sbjct 254810 ATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACT 254869 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTG 18322 || | || || |||| || || || ||||| ||||||||||| Sbjct 254870 TCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343671748895