Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq15 152 5e-32 seq4 120 3e-22 seq8 96.9 3e-15 seq10 84.2 2e-11 >seq15 Length=386167 Score = 152 bits (168), Expect = 5e-32 Identities = 414/629 (66%), Gaps = 15/629 (2%) Strand=Plus/Plus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||| | ||||| | ||||| ||| |||||| || |||||| | ||||| ||||| || Sbjct 128539 CGTCGTTTTGTTTTATTTCCAATTAAATATCATGAAATTTGGCAAATGTATAAAAAAGCT 128598 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 ||||| || |||||||| | |||||| | || | ||| ||| | |||||| || Sbjct 128599 GAAGCTTCATTTTGGACTGCAGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAAT 128658 Query 57654 --TCCCTCAAAGAATC-TGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCA 57710 || | ||| || ||| ||| ||||||| | || || || ||||| || || Sbjct 128659 AATCGTTTAAATAAAAATGAAAGATTTTTTATTTCAAGAGTTTTAGCATTTTTTGCAGCT 128718 Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACG 57770 || |||||||||||||| || ||||| || |||| ||||| |||||| ||| | | Sbjct 128719 TCTGATGGTATTGTTAATGAAAATTTAGTTGAAAATTTTTCTGCAGAAGTTCAAATTCCT 128778 Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830 || || | ||| ||||| || |||||| | || ||||| | ||||| |||| ||| Sbjct 128779 GAAGCTAAATGTTTTTATGGTTTTCAAATTATGATGGAAAATATTCATTCTGAAACTTAT 128838 Query 57831 TCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAGAAACGTAGACTGTTCAAC 57887 || || | | ||||| || | || || || || | ||| | | || || Sbjct 128839 TCTTTATTATTAGATACTTATATTAAAGATCCAAAAGAAAATAAATTT---TTATTTAAT 128895 Query 57888 GCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA 57947 || || |||||||| || || | || || || ||| | | | |||||| || Sbjct 128896 GCAATTGAAACAATTCCATGTATTAAACAAAAAGCTGAATGGGCTTTAAGATGGATTAA- 128954 Query 57948 AGCGCCACGGCCACGTT---CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATA 58004 | | | | || || || || || | || || || || || |||||||| Sbjct 128955 --TGATAATGATGCTTTATATGCTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATT 129012 Query 58005 TTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGC 58064 ||||| || || ||||| ||||||||||| | || ||| | || | ||||| || Sbjct 129013 TTCTTCTCTGGATCTTTTGCTTCAATATTTTGGTTAAAAAAAAGAGGTTTAATGCCAGGT 129072 Query 58065 CTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGC 58124 | || ||| || || || || | | || || ||||| |||||||||||||| || Sbjct 129073 TTAACATTTTCAAATGAATTAATTTGTAGAGATGAAGGTCTTCATACTGATTTTGCTTGT 129132 Query 58125 CTAATGTACTCTCACATTGTCAATAAACC 58153 || | | ||||| | | |||||||| Sbjct 129133 TTATTATTTTCTCATTTAATTAATAAACC 129161 >seq4 Length=1551466 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| | || || || || ||||| | || || ||| | || Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| | ||| || || ||||| | || || ||||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| |||| || ||||| ||||| || |||||| || ||| || || ||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||||||||| | || |||||| | || || |||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGGTA 1333555 Score = 104 bits (114), Expect = 2e-17 Identities = 167/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 ||||| |||||||||||||| |||||| | || || ||||| || || | || |||||| Sbjct 1334016 TCAAA-ATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAA 1333958 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 | || || | | || | || ||| || ||| | || || ||||| | || || Sbjct 1333957 TCATCTGATACAATTGATAATGTTAAATCAAAGA-TCCAAGATAAAGAAGGAATTCCACC 1333899 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || ||| |||| ||||| || || || || ||||| || ||| | || Sbjct 1333898 AGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGA 1333839 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||||||||| ||||||||| | || | ||||| || || |||| Sbjct 1333838 CTACAACATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGGTA 1333783 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| ||||||| ||||| || || | || |||||| | || Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || || | || || || ||||| | || || || || Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| | || || || || ||||| || ||||| || || | |||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||||| || || |||||| | || |||||| | || ||||||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGTA 1333099 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||| | || || ||||| || ||| | || |||||| | || Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | || ||| | ||| || || ||||| | || || || || Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| | || || || || ||||| || ||||| || || | |||||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||||||||| | || | ||| | || || |||| Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGTA 1333327 >seq8 Length=720923 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 31196 CAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGAC 31255 |||||||| || || ||| | || || ||||| || || | || |||||| | || || Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 31256 AGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAG 31315 | | | || | || ||| | ||| || || ||||| | || || || || || Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 31316 CGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAACAT 31374 ||| | || || ||||| ||||| || ||||| | | || | | | |||||||| || Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGA-TGGAAGAACCTTATCTGATTATAATAT 254735 Query 31375 TCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||| ||||||||| | || |||||| | || || |||| Sbjct 254734 TCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGTA 254688 >seq10 Length=718177 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||||||||| || || || | ||||| ||||| || || | || |||||| | Sbjct 468216 AAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATC 468157 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || | | | || | || ||| | ||| || || ||||| | || || || Sbjct 468156 TTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACCAGA 468097 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATT 31367 || || | |||| || ||||| ||||| || ||||| || || || | | |||| Sbjct 468096 TCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTA-GAACATTATCTGATT 468038 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||| |||||||||||||| ||| | ||| | || | ||| | || || ||| Sbjct 468037 ATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGGT 467985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766004382320