Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq15 134 3e-26 seq2 102 2e-16 >seq15 Length=386167 Score = 134 bits (148), Expect = 3e-26 Identities = 295/439 (67%), Gaps = 5/439 (1%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| |||||||| |||||||| || ||||| ||| | || || || || || ||| Sbjct 128986 GTTGCTTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGATCTTTTGCTTCAATATTTTGG 129045 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||| | |||| ||| | || | || ||||| || |||| ||| || Sbjct 129046 TTAAAAAAAAGAGGTTTAATGCCAGGTTTAACATTTTCAAATGAATTAATTTGTAGAGAT 129105 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 |||||||||||| || ||||| || | | || | ||| || ||| ||| Sbjct 129106 GAAGGTCTTCATACTGATTTTGCTTGTTTATTATTTTCTCA---TTTAATTAATAAACCA 129162 Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157 | || ||| ||||| | |||||||| || |||||| |||| | | | Sbjct 129163 AATCCATTAATTGTTCAAAAAATTATTACTGAAGCTGTTGATATTGAAAAAGATTATTTT 129222 Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217 || | | | | |||| | ||| | || ||||| || || || ||| | || || || Sbjct 129223 ACTGATGCTTTACCTGCTTCTTTATTAGGTATGAATTGTAAATTAATGTGTCAATATGTT 129282 Query 102218 GAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGTTAC 102276 |||||||| ||||||| | |||| |||| | || | || |||| ||||||||||| Sbjct 129283 GAATTTGTTGCAGATAGATTATTAGTTGCTTTAGGTAATAAAAAATTT-TATAATGTTAC 129341 Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336 || || || || ||||| |||||||| | | ||| || || ||||||||||| Sbjct 129342 AAATCCATTTGATTTTATGGAAAATATTTCTTTAGCTGGTAAAACTAATTTTTTTGAAAA 129401 Query 102337 GAGAGTCGCCGAGTATCAA 102355 ||||| | || |||||| Sbjct 129402 AAGAGTATCTGATTATCAA 129420 >seq2 Length=2503681 Score = 102 bits (112), Expect = 2e-16 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 35391 CAGAG--GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 ||||| || ||| | || || || || || || |||||| | ||||||||||| |||| Sbjct 1553374 CAGAGTAGGTGATCTTGGTCCTGTGTATGGGTTTCAATGGAGACATTTTGGTGCGAAATA 1553433 Query 35449 TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGC-CAATATACTAA 35507 ||| |||| | | ||||| |||||||||| | ||||| ||||| || || ||| Sbjct 1553434 TGAAGGCTGTGATGCAAATTATGATGGAAAGGGTGTGGATCAGTTGGCAGAAGTTATTAA 1553493 Query 35508 AGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGG 35567 | | | | ||| |||||| ||||| |||| || || ||| | || ||||| ||| | Sbjct 1553494 AAAGCTTAAGA-CCAATCCATATGATCGAAGAATAATCATGTCAGCTTGGAACCCTGCTG 1553552 Query 35568 ATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 || || |||||| | ||||| || || || | ||||||||||||| Sbjct 1553553 ATTTTTCAAAAATGGCTTTACCTCCTTGTCATATTTTTTCTCAATTTTATGT 1553604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583099787805