Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3 488 7e-133 seq15 446 2e-120 >seq3 Length=2066014 Score = 488 bits (540), Expect = 7e-133 Identities = 1482/2275 (65%), Gaps = 39/2275 (2%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || || ||||| | || || || | || || | || ||||||||| || ||||| | | Sbjct 1413378 GTAAACTGAATAGCTGCTGAGGCTGCTTGAGTTCTTAAATAGTACATACCAGTTTTCAAA 1413437 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAACTCGGATCTGCTAT 62164 || |||| || || ||||||||||| || | ||| || | ||| || || Sbjct 1413438 CCTTTTTTCCAACCATAGAAATGCATACTAGTCAACTTTCCCATTGTT-GGAGCTCTTAA 1413496 Query 62165 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224 ||| ||||| | |||||| |||||||||||| || ||||| || || | ||| | | Sbjct 1413497 ATGAATATTTAATGATTGAGATTGATCGATGAAAGCACCCCTATCGGCTGACATATCAAC 1413556 Query 62225 GATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 62283 || || ||||| | | |||||| | || || || || || | | | |||| ||||| Sbjct 1413557 AATAGTTTTTTGAGAGAGTTCCCAGACTGTCTTGTATAAATCTTTAATTTTCTT-TGGAA 1413615 Query 62284 GGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 62340 ||||| | ||||| || || || | ||||| | ||| || ||| | Sbjct 1413616 TGTTTGGCAAGTGTTGAATTGAACCGTTATTTGAAATAATTGACTCCTTCATTGCATTAG 1413675 Query 62341 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTC 62400 ||||| | | |||| | | | | || || ||||||| ||| || || | Sbjct 1413676 ACCATAGACCCATTGCCACTAAATCCTTTAACAAATATGGATTAACTATTTGAAACTCAC 1413735 Query 62401 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62460 | | ||| || | || | ||||||||| |||||| ||||| | | || |||| | Sbjct 1413736 CTGCCAAAACACGACGCGAATAAATATTAGAGGTATAAGGTTCAAAGCATTCGTTATAAC 1413795 Query 62461 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62520 | | |||||||| |||||| ||||| |||||||| || || |||||| |||||| | || Sbjct 1413796 CAAGAATTTGAGAAGTTGAAGCAGTTGGCATAGGAGCGACTAATAAAGAATTTCTTAAAC 1413855 Query 62521 CGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACAN 62580 | | | |||| | ||| |||||| | ||| | | ||| | | || ||| Sbjct 1413856 CATGTTTTCTAACTTTTGCTTTTAATTCTTCGTAGTCCCATAATTGAGAAGGTTTTCTTT 1413915 Query 62581 NNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATG 62640 | |||| |||||| ||| || |||||| ||| || ||||||| Sbjct 1413916 CCCAAAGGTCAGGCTGTAAAATACCTTTAGATGCAGGAGATCCTGAATAGGTTTCATATG 1413975 Query 62641 GTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAA 62700 ||| | ||| |||| | | || || | |||| ||| |||||| ||||| | Sbjct 1413976 TTCCCAATTCAGAAGCAAGTTCAGTAGAAGCTTCAACTGCAGCGTGATAAATTGTTTCGA 1414035 Query 62701 AGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT-TTAAGAGAATA 62759 | || | |||| | | || ||||| | |||||| || |||| |||| | ||| Sbjct 1414036 AAATTTGAATATTCAAAATTTTAGCTTCTGAAGAATCAAAAGG-TAATCTTAACATCATA 1414094 Query 62760 AACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATT 62819 || | || ||||| ||||||||||| | | | || || |||| | || ||||||| || Sbjct 1414095 AATGTATCTGCTAAACCTTGAACACCTAAAGCAATTGGCCTATTTTTCATATTAGATCTT 1414154 Query 62820 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATT 62879 | |||||||||| |||||| | ||| ||| |||| || |||||||| | Sbjct 1414155 TTTGCTTCTGGAACTGGATAAAAGTTACGATCAATAACGCGATCAAGATTTCTTGTTAAA 1414214 Query 62880 ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAACATGTTC 62939 |||||| | | || | || ||| ||||||| | | | | |||| | | | |||| Sbjct 1414215 ACTTTGGCTATTTCATGCAATTTATCAAAATCATACCAACAA-CTATGATCATCTTGTTG 1414273 Query 62940 AAT-------------GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGC 62986 || |||| ||| || | |||||| || || || | ||||| | Sbjct 1414274 AACAAATGCTGGAAGGGCAAGAGAAGCTAAATTACAAACAGCAGTTTCTTGGGCATCTGA 1414333 Query 62987 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATT 63046 ||| | | ||| ||| |||||||||| | | ||||| || | ||| | |||||| Sbjct 1414334 ATACTCAACTATTTCACAGCAAAGATTAGAAGATTTGATCACACCAAGATTCTTTTGATT 1414393 Query 63047 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 63106 ||| ||||| || || ||||| ||||||| ||||| |||||||| | |||| | |||| Sbjct 1414394 ACTTTTTTTATTGCAAGCATCTTTATAAACCATGAAAGGAGTACCGGATTCAGTTTGAGC 1414453 Query 63107 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT--CCTTTCT 63164 ||||| ||| || ||| | | |||| |||| | | ||| || || || | | Sbjct 1414454 TTCTAAAATTGCAGACCATAACTTTTGAGC-TTTAACA-ACTTTTATAGCTTTCCCATTT 1414511 Query 63165 CTTTCGTATAGAGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGG 63223 |||| || || | | | | | ||| || || ||||| || || || | ||| Sbjct 1414512 TTTTCATAG-GATTCAAATAGTTTTTCAAATTCATCTCCATAACAATCACTTAAACCAGG 1414570 Query 63224 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63283 | ||||| ||| | | || | ||| || || | | |||| ||||||||| | Sbjct 1414571 AACTTCATTTGGAGAAAATAATGGCCAATCAAGGTTTTTTTCAACTCTTTTCATAAATAA 1414630 Query 63284 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343 ||| || ||||||||||| ||||| |||||||| |||| || || || || ||| Sbjct 1414631 ATCCGGGATCCAAAGAGCAGGAAATAAATCTCTTGCTCTAATCTCTTCTTTACCATGATT 1414690 Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403 ||| ||| ||| | || | | ||| |||| |||||| ||||| | || || || | Sbjct 1414691 TTTTCTAATATCAATAAAATCAAAAATGTCAGCATGCCATGGTTCAAGATAGATTGCAAA 1414750 Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463 | ||||| ||||| || || || ||||| | ||||| || || |||| | ||||| Sbjct 1414751 GGCACCAGGACGTTTATTACCACCTTGATCAACATATCTTGCAGTCATATTGAATACTCT 1414810 Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523 |||||||| |||||||| || || ||||||| ||||| | ||||| || | || Sbjct 1414811 TAACATTGGGATAATACCATTGGAAGTACCATTAGTACCTGCAATATATGAACCGGTTGC 1414870 Query 63524 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63583 | |||||| ||| || |||||| || || || ||| || | ||| | ||| Sbjct 1414871 TCTGATATTATGAATATGTAAACCTATACCACCAGCATGTTTTGA-AATAACGGCCAT-- 1414927 Query 63584 TT---TTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640 || || || || | || || | ||| |||||| |||| || |||||||| Sbjct 1414928 TTCAGACAAAGTATCGAATATACCATTTATTGAATCATCCTTCATTGCAACAAGAAAACA 1414987 Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700 ||||||||| | | |||||| ||||| ||||| || |||||||| || || || Sbjct 1414988 AGAAGACATTTGCGGCTTTGGAGTTCCAGCATTGAATAATGTTGGAGAAGCATGAGTGAA 1415047 Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAAT 63760 ||||| ||| | || ||| || || |||| | | || |||| |||||| Sbjct 1415048 ATATTTTAGAGACATTAAATTATAAGTTTCAAGAACACGCTCGATATTATCACCATGAAT 1415107 Query 63761 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTT 63820 || || || || | ||| | || || ||||||||||| | | ||| || ||| | Sbjct 1415108 ACCAACCGCAACTCTCATAATCAAATGTTGAGGTCTTTCGGCCACTTTACCATTAATTCT 1415167 Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 63878 || || || ||| |||| | ||||||||| |||||| | || || ||||| || || Sbjct 1415168 TAATAAATAAGATCTTTCAAGAGTTTTAAAGCCAAAAAAATTATAGTTGAAA--TCACGA 1415225 Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATA 63938 || |||| || | || || |||| || || ||| | || | | ||| | Sbjct 1415226 TCATAAACGATTGCAGAGTTAAGCTCTTCAGAATGTTTCATTACACTTTTATAAGTATCA 1415285 Query 63939 CTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 63998 || || ||||||| ||||| | |||| || |||||||| || | | ||| Sbjct 1415286 TCAGATATCATCGGAGCATGTTGGTCTGTTTTTGGGTTAACATAATTATAAAGATCTGAA 1415345 Query 63999 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCG 64058 || || | |||| |||| ||||||| ||| |||| || || || ||||||||||| Sbjct 1415346 ATAACAGCCGAAAATTGTTTCTTTGTTTGCTTATGTAAGTTAGAAATAGCTATTCTGGCA 1415405 Query 64059 GCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGA 64118 || | ||| |||||||| ||||| ||||| | || || |||| || || ||| Sbjct 1415406 GCCAAAATAGCATAATCAGGATGAACAGTAGTCATATAAGCAGCAGTTTCAGCAGCAAGA 1415465 Query 64119 GTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATT 64178 | |||||||| | || || || |||| ||| | || ||||| | || ||| Sbjct 1415466 TTATCCAATTCAGCAGTAGTGACACCATGATAAACACCGGATATAACTCTTTGAGTAATT 1415525 Query 64179 TTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCTAATACGAGACGTG 64238 |||| || ||| | ||||| || | ||||||||| || | | | || | || || Sbjct 1415526 TTAACAGCATCGACATGATTCGAATCTAAGCCATAACAAAGTCGTGAAACTCTAGCAGTT 1415585 Query 64239 ATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACATTT 64293 |||||||| || || | ||| || ||||| || |||| |||||||||| Sbjct 1415586 ATTTTATCGAAACGAACTTGTTCTTTTCGTCCATCTCTTTTATAAACAAACATTT 1415640 >seq15 Length=386167 Score = 446 bits (494), Expect = 2e-120 Identities = 636/894 (71%), Gaps = 6/894 (1%) Strand=Plus/Minus Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334 || |||||| || |||||| || ||| || | |||||| |||||||||||||| || Sbjct 129438 AGCCATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACC 129379 Query 33335 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAA 33394 | || || ||||||||||| |||||||| ||||| |||||||| |||| ||||||| Sbjct 129378 AGCTAAAGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATT 129319 Query 33395 TCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACA 33454 || || || | ||||||||||| || ||||| | |||| ||| | || ||| Sbjct 129318 ACCTAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACA 129259 Query 33455 ATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATAC 33514 |||||| |||| | | | || | ||| |||||| | | |||| |||||| || Sbjct 129258 ATTCATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAAC 129199 Query 33515 CGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAA 33574 || | || ||||| | ||| || | | | ||| || | |||||| ||| Sbjct 129198 AGCTTCAGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAA 129139 Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634 | ||||| || ||||| || ||||| || ||||||| ||||||||| || ||||| Sbjct 129138 TAATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAA 129079 Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694 || | || ||||||| || | ||||| | ||||||||| ||||| || ||||| || Sbjct 129078 TGTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGA 129019 Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCT 33751 ||||| || ||||| || |||||||| |||| | ||| || |||| | | | | Sbjct 129018 GAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATT 128959 Query 33752 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811 |||| ||||| || |||||| || || || | ||| | ||| || || ||||| || Sbjct 128958 ATCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAAT 128899 Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871 |||||||| | | | || ||||| || |||||||| ||||||||| | || | | Sbjct 128898 TGCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGA 128839 Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931 ||| |||| |||||||| ||||| || || ||||| || || |||||| |||| || Sbjct 128838 ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTC 128779 Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACT 33991 | ||| || ||||||| | |||| ||| ||||||||||||| || || |||||| Sbjct 128778 AGGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGA 128719 Query 33992 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTT 34048 ||||||||||| || || || | |||||| || |||| | | ||| | || Sbjct 128718 AGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATT 128659 Query 34049 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 34108 ||||||||||| | ||||||| || ||| | |||||| | ||||||||||| || || Sbjct 128658 ATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTC 128599 Query 34109 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || ||||||||||| | ||| || |||||||||| ||||| || | |||||| Sbjct 128598 AGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817041036880