Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq15 508 6e-139 >seq15 Length=386167 Score = 508 bits (562), Expect = 6e-139 Identities = 656/895 (73%), Gaps = 13/895 (1%) Strand=Plus/Minus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || ||||||||| ||| |||||||||||||| || ||||||||||| | Sbjct 129434 ATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCT 129375 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACC 13687 | || ||||||||||||||||||||||||||| | |||| | | | ||| | | ||| Sbjct 129374 AAAGAAATATTTTCCATAAAATCAAATGGATTTGTA-ACATTATAAAATTTTTTATTACC 129316 Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747 || | | || ||||||||| |||| ||| |||| ||||||| ||||||| | |||||| Sbjct 129315 TAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATT 129256 Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807 |||||||| || |||| | || || ||| | |||||||| ||| ||||| Sbjct 129255 CATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGC 129196 Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATT--TTAGATGTTTAAAA 13865 || | ||||| || || ||| | | || | |||| ||| ||| ||| Sbjct 129195 TTCAGTAATAATTTTTTGAACAATT--AATGGATTTGGTTTATTAATTAAATGAGAAAAT 129138 Query 13866 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13925 | |||||| ||||||||| |||||| || |||||||||| ||| | ||| ||||||||| Sbjct 129137 AATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAAT 129078 Query 13926 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAA 13985 ||||| |||||||| || |||| |||||||||||||||||||| |||||| || || || Sbjct 129077 GTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAG 129018 Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045 ||||| || || ||||| |||||||| || | ||||| ||| || | | || | || Sbjct 129017 AAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTA 128958 Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105 | |||||| || ||||||||||| ||||| ||||||| | ||||||||||| Sbjct 128957 TCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATT 128898 Query 14106 GCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATC-AATAAGTAAGCT 14164 |||||||||||| ||| || ||||| | | | ||| || ||||| ||||| ||| Sbjct 128897 GCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGA- 128839 Query 14165 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224 ||| ||||||| || || |||||||| || |||||||||||||| ||| ||||||| Sbjct 128838 ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTC 128779 Query 14225 CGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14283 | ||| ||||| | || ||||| |||| | |||||||||||||| ||||||||| Sbjct 128778 AGGAATTTGAACTTCTGCAGAAAAAT-TTTCAACTAAATTTTCATTAACAATACCATCAG 128720 Query 14284 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTT 14340 ||||||||||||||| || | || |||||| || || | || || | | | Sbjct 128719 AAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGAT 128660 Query 14341 TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14400 | |||||||| |||||| ||| | ||| | ||| || | |||||||| ||| Sbjct 128659 TATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTT 128600 Query 14401 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14455 ||||||||||||||||| ||| ||||| | |||| || ||||| | ||||| Sbjct 128599 CAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727574241400