Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq15 504 7e-138 >seq15 Length=386167 Score = 504 bits (558), Expect = 7e-138 Identities = 655/895 (73%), Gaps = 13/895 (1%) Strand=Plus/Minus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| || ||||||||| ||| ||||||||||||||||| ||||||||||| | Sbjct 129434 ATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCT 129375 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACC 13475 | || ||||||||||||||||| ||||||||||| |||| | | | ||| | | ||| Sbjct 129374 AAAGAAATATTTTCCATAAAATCAAATGGATTTGTA-ACATTATAAAATTTTTTATTACC 129316 Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535 || | | |||||||||||| |||| ||| |||| ||||||| ||||||| | |||||| Sbjct 129315 TAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATT 129256 Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595 |||||||| || |||| | || ||| ||| | |||||||| ||| ||||| Sbjct 129255 CATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGC 129196 Query 13596 CTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATT--TTAGATGTTTAAAA 13653 || | ||||| | | || ||| | | || | |||| ||| ||| ||| Sbjct 129195 TTCAGTAATAATTTTTTGAACAATT--AATGGATTTGGTTTATTAATTAAATGAGAAAAT 129138 Query 13654 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13713 | |||||| ||||||||| |||||| || |||||||||| ||| | ||| ||||||||| Sbjct 129137 AATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAAT 129078 Query 13714 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 13773 ||||| |||||||| || |||| |||||||||||||||||||| ||| || ||||| || Sbjct 129077 GTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAG 129018 Query 13774 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTG 13833 ||||| || || ||||| |||||||| || | || || ||| || | | || | || Sbjct 129017 AAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTA 128958 Query 13834 TTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATT 13893 | |||||| || ||||||||||| ||||| ||||||| | |||||||| ||| Sbjct 128957 TCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATT 128898 Query 13894 GCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATC-AATAAGTAAGCT 13952 ||||| |||||| || || ||||| | | | ||| || ||||| ||||| ||| Sbjct 128897 GCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAA-TAAAGA 128839 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 ||| ||||||| || || ||||| || || |||||||||||||||||| ||||||| Sbjct 128838 ATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTC 128779 Query 14013 TGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | ||| || || | || ||||| |||| | || ||||||||||||||||||||| Sbjct 128778 AGGAATTTGAACTTCTGCAGAAAAAT-TTTCAACTAAATTTTCATTAACAATACCATCAG 128720 Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTT 14128 ||||||||||||||| || | || |||||| || || | || || | | | Sbjct 128719 AAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGAT 128660 Query 14129 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188 | |||||||| |||||| ||| | ||| | ||| || | |||||||| ||| Sbjct 128659 TATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTT 128600 Query 14189 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14243 ||||||||||||||||| ||| ||||| | |||| || ||||| | ||||| Sbjct 128599 CAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588375252440