Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq10 125 6e-24 seq4 116 3e-21 seq8 95.1 1e-14 seq1 87.8 2e-12 >seq10 Length=718177 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||||| || ||||||||||| || || ||||| Sbjct 467986 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGAT 468045 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| |||||||| || ||| |||| | || |||||||| || Sbjct 468046 AATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGA 468105 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| || ||| || ||| | Sbjct 468106 ATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACT 468165 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAA 20215 || | ||||| ||||| || || || ||||| ||||||||||||||||||||| Sbjct 468166 TCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTTTAAA 468219 >seq4 Length=1551466 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||||||||| || || ||||| Sbjct 1333329 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 1333388 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| |||||||| || ||| |||| | | |||||||| || Sbjct 1333389 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 1333448 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||||||| ||| || | ||| || ||| | ||| | Sbjct 1333449 ATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACT 1333508 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| |||||||||||| || || || ||||| ||||| |||||||| Sbjct 1333509 TCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 109 bits (120), Expect = 5e-19 Identities = 196/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 19923 AAAACATGTGtttaatttaataaattttattataaaatttaaatatattttatcattttC 19982 |||| || | | | ||| || || ||||| | ||||||| || | |||| || | Sbjct 1333046 AAAAAATATCTATTATTAAAATAACTTTATAAAGAAATTTACATGAA----ATCAATTAC 1333101 Query 19983 CTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCA 20042 | |||| ||| || | || ||||| |||||||| |||||||| || || ||||| | Sbjct 1333102 CGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATA 1333161 Query 20043 TAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCA 20102 ||| || |||||| |||||||| || ||| |||| | | |||||||| || | Sbjct 1333162 AGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAA 1333221 Query 20103 CGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTT 20162 |||||||| || ||| || || || | ||| || ||| | ||| || Sbjct 1333222 TACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTT 1333281 Query 20163 CCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | | ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct 1333282 CTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| || || || || | Sbjct 1333557 CCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGAC 1333616 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || ||||| |||||||| || ||| |||| | | ||||| || || Sbjct 1333617 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGA 1333676 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| || ||| || ||| | Sbjct 1333677 ATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACT 1333736 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || || || || || || || || ||||||||||||||||| Sbjct 1333737 TCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 || || || ||||| || || ||||||||||| |||||||| || | |||| || | Sbjct 1333797 CTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCA 1333856 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||| ||||| || || || | || | | |||||||| || | |||||||| Sbjct 1333857 TCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTA 1333916 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || || ||| ||| || | ||| | ||| | ||| ||| | |||||| Sbjct 1333917 TCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATG 1333976 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAA 20215 ||||| || || || || ||||| |||||||||||||| ||| Sbjct 1333977 GTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTGAAA 1334018 >seq8 Length=720923 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19979 tttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 || ||||||| ||| || | || ||||| || || ||||||||||| || || ||||| Sbjct 254687 TTACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 254746 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||| |||||||| || ||| |||| | | |||||||| Sbjct 254747 GATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 254806 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||| || ||||| ||| || | ||| || ||| | ||| Sbjct 254807 GGAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCA 254866 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTG 20205 ||| | ||||| ||||| || || || ||||||||||||||||| Sbjct 254867 ACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq1 Length=2713227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||||| || ||||||||||| ||||| ||||| Sbjct 1439211 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGAT 1439270 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| | |||||| |||||||| || ||| | || | || |||||||| || Sbjct 1439271 AAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGG 1439330 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| | ||| || |||| | Sbjct 1439331 ATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACT 1439390 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAA 20199 || | || || ||||| || || | ||||| ||||| Sbjct 1439391 TCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419586836925951