Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq15 372 7e-98 seq4 197 3e-45 seq10 194 4e-44 seq1 187 6e-42 seq8 159 8e-34 seq13 89.7 1e-12 >seq15 Length=386167 Score = 372 bits (412), Expect = 7e-98 Identities = 627/902 (70%), Gaps = 19/902 (2%) Strand=Plus/Plus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| |||||||||| | || ||| || ||| ||||| ||| | || | ||| Sbjct 128545 TTTGTTTTATTTCCAATTAAATATCATGAAATTTGGCAAATGTATAAAAAAGCTGAAGCT 128604 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT--- 268819 || |||||||||| ||||||| | ||| | | | || ||| |||||||| ||| Sbjct 128605 TCATTTTGGACTGCAGAAGAAATTGATTTAAGTAAAGATTTACATGATTGGAATAATCGT 128664 Query 268820 TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGAT 268879 ||||| | | |||||| ||||| || || | || |||||||||| | |||| Sbjct 128665 TTAAATAAAAATGAAAGATTTTTTATTTCAAGAGTTTTAGCATTTTTTGCAGCTTCTGAT 128724 Query 268880 GGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCC 268939 ||||| ||||| |||||| |||| || || || | | ||| || || ||||||||||| Sbjct 128725 GGTATTGTTAATGAAAATTTAGTTGAAAATTTTTCTGCAGAAGTTCAAATTCCTGAAGCT 128784 Query 268940 AGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTA 268999 | ||||||||| || || || || || |||||||||||||| || | || | || Sbjct 128785 AAATGTTTTTATGGTTTTCAAATTATGATGGAAAATATTCATTCTGAAACTTATTCTTTA 128844 Query 269000 TTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGA 269059 ||| ||||||||||||| | ||| || ||||| ||| ||||| | | || | Sbjct 128845 TTATTAGATACTTATATTAAAGATCCAAAAGAAAATAAATTTTTATTTAATGCAATTGAA 128904 Query 269060 ACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCG 269119 || || ||| | | | ||||| ||||||||||| | | |||||| || |||| | Sbjct 128905 ACAATTCCATGTATTAAACAAAAAGCTGAATGGGCTTTAAGATGGATTAATGATAATGAT 128964 Query 269120 CCTT---ACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGG 269176 ||| | | ||||| |||||||||||||| ||||| |||||||| ||||| || || Sbjct 128965 GCTTTATATGCTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGA 129024 Query 269177 TCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCT 269236 |||||||| | || |||||||| || |||||||| | |||||||| ||||| || || Sbjct 129025 TCTTTTGCTTCAATATTTTGGTTAAAAAAAAGAGGTTTAATGCCAGGTTTAACATTTTCA 129084 Query 269237 AACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACT 269296 || ||||| || | || || |||||| | || || || ||||||||||||||| || Sbjct 129085 AATGAATTAATTTGTAGAGATGAAGGTCTTCATACTGATTTTGCTTGTTTATTATTTTCT 129144 Query 269297 AATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTT 269356 ||| || | ||||| || | | || | ||||||| | ||||||| Sbjct 129145 CATTTAATT---AATAAACCAAATCCATTAATTGTTCAAAAAATTATTACTGAAGCTGTT 129201 Query 269357 TCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCT--ATCGATCTTATCGGTATGAATA 269414 | | |||| ||| | | | || || ||| || || || | ||| ||||||||| Sbjct 129202 GATATTGAAAAAGATTATTTTACTGATGCTTTACCTGCTTCTTTATTA--GGTATGAATT 129259 Query 269415 GCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGT 269474 | |||| ||| ||||| || | || || | |||||||| | || ||||||| Sbjct 129260 GTAAATTAATGTGTCAATATGTTGAATTTGTTGCAGATAGATTATTAGTTGCTTTAGG-- 129317 Query 269475 TTAGTAAAAAA---TATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531 || ||||||| ||||| ||| |||||| ||| ||||||||| ||||| || |||| Sbjct 129318 -TAATAAAAAATTTTATAATGTTACAAATCCATTTGATTTTATGGAAAATATTTCTTTAG 129376 Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGT 269591 ||||| ||||||| || || || | ||| | | ||||| ||| ||||| ||| Sbjct 129377 CTGGTAAAACTAATTTTTTTGAAAAAAGAGTATCTGATTATCAAAAAGCTGGTGTTATGG 129436 Query 269592 CT 269593 || Sbjct 129437 CT 129438 >seq4 Length=1551466 Score = 197 bits (218), Expect = 3e-45 Identities = 184/231 (80%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| ||||| |||| ||| | || |||||||| ||||||||||||||| Sbjct 1333554 ATACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCA 1333613 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||||||||||||||||| |||||| ||||||||||||| | ||||| || ||| Sbjct 1333614 GACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGA 1333673 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTC 104508 || || ||||||||||| ||||| ||| ||||| ||||| || | ||||| || ||| Sbjct 1333674 GGAATACCTTCTTTATCTTGAAT-TTTACTTTTGACATTATCAATAGTATCTGAAGATTC 1333732 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| |||| || || ||||||||||| | || || ||||| || ||||| Sbjct 1333733 TACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 188 bits (208), Expect = 2e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| ||||| |||| ||| | |||||| ||||| ||||||||||| |||||| Sbjct 1333101 CCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGAT 1333160 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||||| ||||||||| |||||||| | | |||||||||||||| Sbjct 1333161 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGA 1333220 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||||||||| |||||||| | || ||||| || | ||||| | ||| || Sbjct 1333221 ATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACT 1333280 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| || ||||| || | ||||| ||||| || ||||| Sbjct 1333281 TCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 176 bits (194), Expect = 1e-38 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | |||| ||| | || |||||||| ||||||||||| ||| Sbjct 1333326 ATACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 1333385 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||||| ||||||| ||||||||| |||||||| | | |||||||| || Sbjct 1333386 GATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGT 1333445 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| ||||| |||| ||| ||||| || | ||||| | ||| Sbjct 1333446 GGAATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCA 1333505 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||||| || |||||||| | ||||| ||||| || ||||| Sbjct 1333506 ACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 165 bits (182), Expect = 2e-35 Identities = 177/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || || | |||| ||| | || |||||||| ||||| || |||||| Sbjct 1333782 ATACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCA 1333841 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||||||||| ||||||| ||| || || || || |||| | |||||||| || Sbjct 1333842 GATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGT 1333901 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| || ||||||| ||| ||||| || | ||||| | ||| Sbjct 1333902 GGAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCA 1333961 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || |||| ||||| || |||||||| | || || || || || ||||||||| Sbjct 1333962 ACTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 1334015 >seq10 Length=718177 Score = 194 bits (214), Expect = 4e-44 Identities = 183/231 (79%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| |||||| || |||||||| ||||||||||| |||||| Sbjct 467986 CCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGAT 468045 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||||| |||||| ||||||||||||| || |||||||| || || Sbjct 468046 AATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGA 468105 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||||||||| ||||| ||| ||||| ||||| || | ||||| || ||| || Sbjct 468106 ATACCTTCTTTATCTTGAAT-TTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| ||||| || ||||| || | ||||| ||||| || |||||||| Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTT 468215 >seq1 Length=2713227 Score = 187 bits (206), Expect = 6e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | |||| |||||| || |||||||| ||||| ||||| ||| Sbjct 1439208 ATACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCA 1439267 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||| || ||||||| |||||| |||||||| |||| || |||||||| || Sbjct 1439268 GATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGT 1439327 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| ||||| || | ||| ||||| || | |||||| || ||| Sbjct 1439328 GGGATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCC 1439387 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || |||| || ||||| ||||| ||||| ||||| ||||| Sbjct 1439388 ACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 >seq8 Length=720923 Score = 159 bits (176), Expect = 8e-34 Identities = 172/225 (76%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| ||||| |||| ||| | || |||||||| ||||||||||| |||||| Sbjct 254690 CCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 254749 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||| || ||||||| |||||| ||||||||||| | | |||||||| || || Sbjct 254750 AAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 254809 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||||||||| | || ||| ||||| || || || | ||||| | ||| || Sbjct 254810 ATACCTTCTTTATCTTAGAT-TTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAAC 254868 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 |||| |||||||| |||||||| | ||||| ||||| || || Sbjct 254869 TTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq13 Length=441995 Score = 89.7 bits (98), Expect = 1e-12 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTA 165157 ||||| ||||||||| || |||||| || | |||||||||||||||||||| || Sbjct 103919 GATAAAGATGAATGGTTAACATGGAATTCAAGATCTGATCCTGTTTTACATATAGAATTA 103978 Query 165158 AGAAGATGGGCAGATATGAT-GTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGAT 165216 ||||||||||| ||||| | |||| | || || ||| | ||||| | |||| | || || Sbjct 103979 AGAAGATGGGCTGATATTTTAGTTG-TTGCTCCATTATCTGCAAATACTTTATCTAAAAT 104037 Query 165217 AGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATA 165269 | ||| | ||| |||| || | || | | ||||||| ||||||| Sbjct 104038 TTCATTAGGTTTGTGTGATAATTTAATTACAAATGTTATTAGAGCTTGGAATA 104090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397352587268