Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 1e-11 >seq1 Length=2713227 Score = 82.4 bits (90), Expect = 1e-11 Identities = 190/281 (68%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || |||||| | | ||| |||| ||||||| || ||||| || || || || || || Sbjct 975691 GCCAAACGTCATAGAAAGAT-TCTTAGAGATAATATTCAAGGTATAACAAAACCTGCAAT 975633 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | | ||||| || || ||| | || | || | |||||||| | Sbjct 975632 TAGAAGATTAGCAAGAAGAGGTGGTGTTAAACGTATTTCAGCTTTAATTTATGAAGAAGT 975573 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||||||| || | ||| | | | ||||| |||||| | ||||| || Sbjct 975572 TAGAAATGTTTTAAAAACTTTCTTAGAAAATGTTATTAGAGATGCTGTTACTTATACTGA 975513 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || |||||| | || ||||| || || | ||| | || ||||| || ||| | ||||| Sbjct 975512 ACATGCTAAAAGAAAAACTGTTACTTCTTTAGATGTTGTTTATGCTTTAAAAAGACAAGG 975453 Query 16672 CCGTAAGATT-TATGGTTTTGGAAGTTAATCTTCTAATCAA 16711 | || ||| ||||||||||| |||||| ||||| || Sbjct 975452 AAG-AACATTATATGGTTTTGGTGGTTAATTAACTAATTAA 975413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075135084203