Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq15 475 4e-129 >seq15 Length=386167 Score = 475 bits (526), Expect = 4e-129 Identities = 632/880 (72%), Gaps = 5/880 (1%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||||||||||||| ||||||||||| |||||||| || || || | || || ||| Sbjct 129423 TTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAATATT 129364 Query 21244 TTCCATAAAATCAAATGGATTT-TCAGATTTAAATATTTTATTACAACCCAGTTCTGATA 21302 |||||||||||||||||||||| | | ||| || ||||| ||| ||| | | || Sbjct 129363 TTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTT-TTATTACCTAAAGCAACTA 129305 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 ||||||||||||| |||||||| | ||||||||||||||||| |||||||||||| | | Sbjct 129304 ATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAATA 129245 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTA 21422 | |||| | ||| | || ||| || |||||| ||| || |||||| ||| | Sbjct 129244 AAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTAATAA 129185 Query 21423 TATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | ||| | | ||| | | || || | ||| || ||| | ||||| |||| Sbjct 129184 TTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAATAATAAACAAGCAA 129125 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 ||||| ||| | ||||||||| |||| ||||||||||| |||||||||||||| |||| Sbjct 129124 AATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAAACCTGGCA 129065 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 |||| ||||| |||||||||||||||||||| ||||| | ||| || |||||||| || | Sbjct 129064 TTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAAAATACCTT 129005 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662 |||| |||||||| |||||||||| |||| | ||| || || ||||| |||||| Sbjct 129004 CAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTATCATTAATCCATC 128945 Query 21663 TTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGAT 21722 || ||||||| || |||| ||||||||| |||||| ||||| || || || | | Sbjct 128944 TTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCATTAAATAAAA 128885 Query 21723 GAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAAT 21782 || ||||| | | ||| | || | ||| ||||||||| Sbjct 128884 ATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATAAGTTTCAGAAT 128825 Query 21783 GTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCT 21842 | |||||||| ||| || ||||| || ||||||||| | || || | | |||||| | Sbjct 128824 GAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGGAATTTGAACTT 128765 Query 21843 CGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATG 21902 | | | |||| || | | || |||||||| || || |||||| || |||||||||| Sbjct 128764 CTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGCTGCAAAAAATG 128705 Query 21903 CCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA---TTTTTTCCAATCTAATA 21959 | || | || |||||| ||| ||| || | |||| || |||||||| || Sbjct 128704 CTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTATTCCAATCATGTA 128645 Query 21960 AATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACA 22019 ||||||| |||||| | |||||| | |||||||| ||| ||| |||||||||| Sbjct 128644 AATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCTTTTTTATACA 128585 Query 22020 TAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 | ||| || |||| |||| | |||||||||| ||||| Sbjct 128584 TTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900327938040