Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq15 273 6e-68 seq3 93.3 1e-13 >seq15 Length=386167 Score = 273 bits (302), Expect = 6e-68 Identities = 513/747 (69%), Gaps = 18/747 (2%) Strand=Plus/Plus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 || ||||||| ||||| | | || ||||| ||| ||| ||| |||| |||||| Sbjct 128699 TTTTAGCATTTTTTGCAGCTTCTGATGGTATTGTTAATGAAAATTTAGTTGAAAATTTTT 128758 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 | | ||| ||||| || || || | |||||| |||||| | ||||| ||||| |||| Sbjct 128759 CTGCAGAAGTTCAAATTCCTGAAGCTAAATGTTTTTATGGTTTTCAAATTATGATGGAAA 128818 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAG--AAGATAAAGACGA 22391 || |||| | ||||| |||||| | | || | ||| || ||||| | | || Sbjct 128819 ATATTCATTCTGAAACTTATTCTTTATTATTAGAT--ACTTATATTAAAGATCCAAAAGA 128876 Query 22392 ACAACGAAACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTG 22451 | | | ||||| || ||| || |||| || ||||| | || || || || Sbjct 128877 AAATAAATTTTTATTTAATGCAATTGAAACAATTCCATGTATTAAACAAAAAGCTGAATG 128936 Query 22452 GGCGCTGAAATGGATGAAC---AATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGC 22508 ||| | | |||||| || ||||| || || || ||| | | |||| ||||| Sbjct 128937 GGCTTTAAGATGGATTAATGATAATGATGCTTTATATGCTGAAAGATTAGTTGCTTTTGC 128996 Query 22509 TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCG 22568 || |||||||| |||||||| |||||| | ||| | |||| |||||| |||||||| | Sbjct 128997 TGCTGTTGAAGGTATTTTCTTCTCTGGATCTTTTGCTTCAATATTTTGGTTAAAAAAAAG 129056 Query 22569 TGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCA 22628 | | ||||| ||| |||| ||||||||||| |||||| | ||||||| |||||||| Sbjct 129057 AGGTTTAATGCCAGGTTTAACATTTTCAAATGAATTAATTTGTAGAGATGAAGGTCTTCA 129116 Query 22629 TACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAAC---TTCCATATGA 22685 ||| |||||||| ||| | ||| | |||| | ||| |||||| ||||| Sbjct 129117 TACTGATTTTGCTTGTTTATTATTT---TCTCATTTAATTAATAAACCAAATCCAT---T 129170 Query 22686 AACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGC-GAGG 22744 || ||| | | |||||||| | || ||||| ||||| ||| ||| | || | Sbjct 129171 AATTGTTCAAAAAATTATTACTGAAGCTGTTGATATTGAA-AAAGATTATTTTACTGATG 129229 Query 22745 CGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTG 22804 | ||||| | | | | ||||| ||| ||| |||| || |||| || |||||| Sbjct 129230 CTTTACCTGCTTCTTTATTAGGTATGAATTGTAAATTAATGTGTCAATATGTTGAATTTG 129289 Query 22805 TTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCAT 22864 |||||||| | ||||| || | | ||| || ||| |||||| || ||||||| Sbjct 129290 TTGCAGATAGATTATTAGTTGCTTTAGGTAATAAAAAATTTTATAATGTTACAAATCCAT 129349 Query 22865 TTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTG 22924 |||| | |||||| |||||| | | || || || ||||| || ||||||||||| Sbjct 129350 TTGATTTTATGGAAAATATTTCTTTAGCTGGTAAAACTAATTTTTTTGAAAAAAGAGTAT 129409 Query 22925 GTGAATACCAAAAAGCAGGTGTTATGG 22951 ||| || |||||||| |||||||||| Sbjct 129410 CTGATTATCAAAAAGCTGGTGTTATGG 129436 >seq3 Length=2066014 Score = 93.3 bits (102), Expect = 1e-13 Identities = 380/588 (65%), Gaps = 12/588 (2%) Strand=Plus/Minus Query 363373 GATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATC 363432 ||| || | ||| || |||| || | ||| || | || | ||| || ||| | || Sbjct 1415221 GATTTCAACTATAATTTTTTTGGCTTTAAAACTCTTGAAAGATCTTATTTATTAAGAATT 1415162 Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 |||||| | | | ||| | || || ||| || | ||| | ||||| ||||||| ||| Sbjct 1415161 AATGGTAAAGTGGCCGAAAGACCTCAACATTTGATTATGAGAGTTGCGGTTGGTATTCAT 1415102 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTG-CTCGTGTATT-CA 363550 | || | || | ||||||| ||||| || | || || |||| || Sbjct 1415101 GGTGATAATATCGAGCGTGTTCTTGAAACTTATAA--TTTAATGTCTCTAAAATATTTCA 1415044 Query 363551 CGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCT 363610 | || || | |||||| | | |||||||||||||| || || || ||||||||||| | Sbjct 1415043 CTCATGCTTCTCCAACATTATTCAATGCTGGAACTCCAAAGCCGCAAATGTCTTCTTGTT 1414984 Query 363611 TTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACT-TAAGAATTGT 363669 ||||| | ||||||||| ||||| || | ||||| || || || | | ||| || Sbjct 1414983 TTCTTGTTGCAATGAAGGATGATTCAATAAATGGTATATTCGATACTTTGTCTGAAATG- 1414925 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA--C 363727 || ||||||| || |||| || || || ||| || || || ||| | | ||| | Sbjct 1414924 GCCGTTATTTCAAAACATGCTGGTGGTATAGGTTTACATATTCATAATATCAGAGCAACC 1414865 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGT 363786 | || || ||| || || || ||| || ||||| | | || ||| | | Sbjct 1414864 GGTTCA--TATATTGCAGGTACTAATGG-TACTTCCAATGGTATTATCCCAATGTTAAGA 1414808 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || || | | ||||| || || || || || ||||| || || || || ||| Sbjct 1414807 GTATTCAATATGACTGCAAGATATGTTGATCAAGGTGGTAATAAACGTCCTGGTGCCTTT 1414748 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || || ||||| || || ||||| || |||||||| ||| |||| | | ||||| Sbjct 1414747 GCAATCTATCTTGAACCATGGCATGCTGACATTTTTGATTTTATTGATATTAGAAAAAAT 1414688 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGG 363954 || ||||| || | | ||| | ||| | || ||| |||||| Sbjct 1414687 CATGGTAAAGAAGAGATTAGAGCAAGAGATTTATTTCCTGCTCTTTGG 1414640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352414355522