Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01]
71 sequences; 20,313,720 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq4 143 2e-29
seq10 134 9e-27
seq8 123 2e-23
seq1 122 6e-23
>seq4
Length=1551466
Score = 143 bits (158), Expect = 2e-29
Identities = 174/236 (74%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 38083 AATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTG 38141
||||| ||||| ||||| || | | || |||||||| || ||| |||||||||||
Sbjct 1333092 AATCAATTACCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTA 1333151
Query 38142 TAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGA 38201
|||||||| || | | || |||||||||||||||||||| || | |||||||||
Sbjct 1333152 TAATCAGATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGA 1333211
Query 38202 TCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA 38261
|| | || | |||||||| || ||| || ||| ||||| | | ||||||
Sbjct 1333212 TCAGGAGGAATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGAT 1333271
Query 38262 CTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||||||| ||||| |||||||| ||||| ||||| || || || |||||
Sbjct 1333272 GATTCAACTTCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327
Score = 143 bits (158), Expect = 2e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || | || || ||||||||||| || ||||||||||| |||||||
Sbjct 1333327 TACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAG 1333386
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | | || |||||||||||||||||||| || | ||||||||||| | |
Sbjct 1333387 ATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTG 1333446
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||| || ||||||| || ||||| | | |||||| |||||
Sbjct 1333447 GAATTCCTTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAA 1333506
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || ||||| |||||||| || || ||||| || || || |||||
Sbjct 1333507 CTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555
Score = 134 bits (148), Expect = 9e-27
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || | | || ||||||||||| || ||||||||||| || ||||
Sbjct 1333555 TACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAG 1333614
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| | |||| ||||||||||| || ||||| |||| |||||||| || | |
Sbjct 1333615 ACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAG 1333674
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||| || |||||| || ||||| | | ||||||| | ||| |
Sbjct 1333675 GAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTA 1333734
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| || || || ||||| || ||||| || || || || |||||
Sbjct 1333735 CTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783
Score = 122 bits (134), Expect = 6e-23
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | | || || ||||||||||| || |||||||| ||||| ||||
Sbjct 1333783 TACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAG 1333842
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| ||| | | || |||||||| || ||||| || |||| ||||||||||| | |
Sbjct 1333843 ATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTG 1333902
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||| || || ||| || ||||| | | ||||| |||||
Sbjct 1333903 GAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAA 1333962
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||||||| ||||| |||||||| || || || || ||||| || ||||| ||
Sbjct 1333963 CTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTT 1334014
>seq10
Length=718177
Score = 134 bits (148), Expect = 9e-27
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||||||||| || | || || ||||| | ||| || ||||||||||| ||||||||
Sbjct 467985 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGA 468044
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | | || ||||||||||| || ||||| |||| | ||||||||| | ||
Sbjct 468045 TAATGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG 468104
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| |||||||| || |||||| || ||||| | | |||||| | ||||||
Sbjct 468105 AATACCTTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAAC 468164
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|||||| ||||| |||||||| || |||||||| || || || ||||| |||
Sbjct 468165 TTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTTTT 468216
>seq8
Length=720923
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146
|||||| ||||| || | | || ||||||||||| || ||||||||||| |||||
Sbjct 254686 ATTACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATC 254745
Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206
||| || | | | || ||||||||||| || ||||| || | ||||||||||| |
Sbjct 254746 AGATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGG 254805
Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266
|| | |||||||| || ||||| || || || | | |||||| |||
Sbjct 254806 TGGAATACCTTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTC 254865
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTG 38314
||||||||| |||||||||||||| || || ||||| || || || ||
Sbjct 254866 AACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913
>seq1
Length=2713227
Score = 122 bits (134), Expect = 6e-23
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || | || || ||||| | ||| || |||||||| || |||||||
Sbjct 1439209 TACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAG 1439268
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| ||| | | | || ||||||||||| || ||||| |||| | ||||||||| | |
Sbjct 1439269 ATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTG 1439328
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||| || |||||| || ||||| | | ||||| | ||| |
Sbjct 1439329 GGATACCTTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCA 1439388
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308
||||||| || ||||||||||| || | |||||| || ||
Sbjct 1439389 CTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946910166001
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |