Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 168 6e-37 seq8 156 4e-33 seq10 145 7e-30 seq1 123 2e-23 >seq4 Length=1551466 Score = 168 bits (186), Expect = 6e-37 Identities = 177/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || |||||| |||| || | ||||| || || ||| Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || | | | || |||||| ||| || |||||||| |||||||| || | Sbjct 1333495 GATACTATTGA-TAATGTTAAATCAAAAATTCAA-GATAAAGAAGGAATTCCACCAGATC 1333438 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | ||||||||||| |||||||||||||||| | | || | ||||| | Sbjct 1333437 AACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATA 1333378 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||||| || || |||||||| |||| ||||||| || Sbjct 1333377 ATATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 1333329 Score = 161 bits (178), Expect = 9e-35 Identities = 177/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || |||||||| |||||| | || || | ||||| || || ||| Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | ||| | || | ||| || |||||||| ||||| ||||| || Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAA-GATAAAGAAGGTATTCCTCCTGATCA 1333209 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| |||||||||||||||| | | || | ||||| || Sbjct 1333208 ACAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAA 1333149 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT 25230 |||||||||||| || || || |||||||| || || ||||||| || |||| Sbjct 1333148 TATTCAAAAAGAGTCTACACTTCATTTAGTTCTTAGATTAAGAGGCGGTAATT 1333096 Score = 149 bits (164), Expect = 5e-31 Identities = 174/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || ||||| | ||||| | ||||| || || || Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || |||| ||| |||| ||| || |||||||| ||||| || || Sbjct 1333723 GATACTATTGATAATGTCAA--AAGTAAAAT-TCAA-GATAAAGAAGGTATTCCTCCAGA 1333668 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | |||||||| || |||||||||||||| | | | ||| || || || Sbjct 1333667 CCAACAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTA 1333608 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| || || |||||||| || || ||||||| || Sbjct 1333607 TAATATTCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGTGG 1333557 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || |||||||| || |||||| |||| || | ||||| || || || Sbjct 1334012 AATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGAATCATC 1333953 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| || || || | || ||| ||| || |||||||| |||||||| || || Sbjct 1333952 TGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACCAGATCA 1333893 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || ||||| || ||||||||||||| | | ||| | || ||||| Sbjct 1333892 ACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 1333833 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || || |||||||| |||| || ||||| || Sbjct 1333832 CATTCAAAAAGAATCAACTCTTCATTTAGTCTTAAGACTTAGAGGTGG 1333785 >seq8 Length=720923 Score = 156 bits (172), Expect = 4e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25002 CAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGAC 25061 ||||| ||||| || ||||| || |||||| | || || | ||||| || || ||||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 25062 ACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACA 25120 ||||| || | || | || |||||| || |||||||| |||||||| || ||||| Sbjct 254853 ACTATTGA-TAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACA 254795 Query 25121 GCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATAT 25180 || | |||||||| || |||||||||||||||| | || | ||||| ||||| Sbjct 254794 ACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATAT 254735 Query 25181 TCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT 25230 |||||||||||| || || |||||||| || || |||||||||| |||| Sbjct 254734 TCAAAAAGAATCAACTCTTCATTTAGTTCTTAGATTAAGAGGAGGTAATT 254685 >seq10 Length=718177 Score = 145 bits (160), Expect = 7e-30 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||| ||||| || || || || |||||| | || || | ||||| || || Sbjct 468216 AAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGAATC 468157 Query 25055 GTCTGACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 ||||| ||||| || | | | || |||| ||| || |||||||| |||||||| Sbjct 468156 TTCTGATACTATTGA-TAATGTTAAAAGTAAAATTCAA-GATAAAGAAGGTATTCCACCA 468099 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || ||||| | | |||||||| || |||||||||||||||| | | || | ||| Sbjct 468098 GATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGAT 468039 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||||||||| || |||||||||| |||| ||||||| || Sbjct 468038 TATAATATTCAAAAAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG 467986 >seq1 Length=2713227 Score = 123 bits (136), Expect = 2e-23 Identities = 167/228 (73%), Gaps = 5/228 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| || || | || |||||| | ||||| | |||||||| || ||||| || || Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 25068 GAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || | | | || | |||| ||| || |||||||| || ||||| || ||||| | Sbjct 1439368 GA-TAATGTTAAATCCAAAATTCAA-GATAAAGAAGGTATCCCACCAGATCAACAAAGAT 1439311 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || |||||||||||||||| | ||| | ||||| || ||||||| Sbjct 1439310 TAATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAA 1439251 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233 ||||||| || |||||||||| |||| ||||||| || |||||| Sbjct 1439250 AAGAATCAACTTTACATTTAGTTTTAAGATTAAGAGGTGG-TATTATT 1439204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327625035865