Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq15 372 3e-98 >seq15 Length=386167 Score = 372 bits (412), Expect = 3e-98 Identities = 633/907 (70%), Gaps = 29/907 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||| || || ||| |||||||||| ||||| || || || | Sbjct 129435 CATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGC 129376 Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCA---CC 92904 ||||| || | || | | |||||| | | |||||| | |||| | || Sbjct 129375 TAAAGAAATATTTTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACC 129316 Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||||| ||||||||||| || |||||||| | || ||| |||| || | | Sbjct 129315 TAAAGCAACT-----AATAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTA 129261 Query 92963 CAATTCATTCCTAG--AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTA 93020 |||||||| |||| |||| | |||||| ||| || || || ||||||| || || Sbjct 129260 CAATTCATACCTAATAAAGAAG--CAGGTAAAGCATCAGTAAAATAATCTTTTTCAATAT 129203 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCT-ACT--ATTTGGTGGTTT--TTGTACGAC 93075 |||| ||||| | | |||| | || | | | ||||||| || || | || Sbjct 129202 CAACAGCTTCAGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAG 129143 Query 93076 ATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTC 93135 | ||| | ||| || ||||| || ||||| | |||||| |||| | || || || Sbjct 129142 AAAAT-----AATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTC 129088 Query 93136 ATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAA 93195 ||| |||||||||||||| | | |||| ||| || | |||||||||||||||||| Sbjct 129087 ATTTGAAAATGTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAA 129028 Query 93196 ACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATT 93255 | ||||| || || |||||||| || || ||||| || || | | ||| ||| | Sbjct 129027 AGATCCAGAGAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAA 128968 Query 93256 TGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 || |||| | |||||| |||||||||| || ||||||| |||||||| || | Sbjct 128967 AGCATCATTATCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAAT 128908 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 |||||| || || ||||||| | | || | | |||| || || ||||| | Sbjct 128907 TGTTTCAATTGCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAA 128848 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 ||| | |||||| |||||||||| | ||| ||||| |||||| || || || ||||| Sbjct 128847 TAATAAAGAATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACA 128788 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | ||||||| | || || |||||| |||||| | || || | ||||||||| || || Sbjct 128787 TTTAGCTTCAGGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAAT 128728 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCATC 93552 |||||| || ||||||||||| || || | || || ||||| |||| | | || Sbjct 128727 ACCATCAGAAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATT 128668 Query 93553 TTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | | |||| |||||| || |||||| | ||| | |||||| |||||||||| Sbjct 128667 TAAACGATTATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAA 128608 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || ||||| |||||||| ||||| | ||| || || ||||||| ||||||||||| || Sbjct 128607 TGAAGCTTCAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAAC 128548 Query 93673 AAAACGA 93679 ||||||| Sbjct 128547 AAAACGA 128541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860305786040