Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 seq4 131 1e-25 seq8 111 1e-19 seq1 87.8 2e-12 >seq10 Length=718177 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 111180 TTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGA 111239 ||||||||||||||||||||| ||||| | || || ||||| ||||| | ||| || Sbjct 468219 TTTAAAAATGCAAATTTTTGTTAAAACCTTAACAGGTAAAACAATTACTTTAGAAGTTGA 468160 Query 111240 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111299 | | ||| || ||| | || ||| |||||| || |||||||| |||| Sbjct 468159 ATCTTCTGATACTATTGATAATGTTAAAAGTAAAATTCAAGATAAAGAAGGTATTCCACC 468100 Query 111300 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111359 ||||||||||| | |||| ||| || |||||||| |||||| || ||| | | || Sbjct 468099 AGATCAACAAAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACATTATCTGA 468040 Query 111360 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398 ||||||||| ||||||||||| || |||||||||| || Sbjct 468039 TTATAATATTCAAAAAGAATCAACTTTACATTTAGTTTT 468001 >seq4 Length=1551466 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||| ||||| | || || |||||||||||| ||||| ||| | Sbjct 1333555 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTTGAATCATCT 1333496 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || ||| ||||||| || |||||||| |||| |||||| Sbjct 1333495 GATACTATTGATAATGTTAAATCAAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 1333436 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || |||||||| |||||| || ||| | | ||||||||| Sbjct 1333435 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333376 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || ||||||||||| || || |||||||| || Sbjct 1333375 ATTCAAAAAGAATCAACTCTTCATTTAGTTTT 1333344 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| ||||| |||| || ||||| ||||| | ||| ||| | Sbjct 1333327 ATGCAAATTTTTGTTAAAACTTTGACAGGTAAAACAATTACTTTAGAAGTTGAATCATCT 1333268 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || || || ||| || |||||||| |||| |||||| Sbjct 1333267 GATACTATTGATAATGTTAAGTCCAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 1333208 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || |||||||| |||||| || ||| | | ||||||||| Sbjct 1333207 CAACGTTTGATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACCTTATCTGATTATAAT 1333148 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || |||||||| |||||||| |||||||| Sbjct 1333147 ATTCAAAAAGAGTCTACACTTCATTTAGT 1333119 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || | || || || || || || | ||| ||| | Sbjct 1333783 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACAATCACTTTAGAAGTAGAATCTTCA 1333724 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || ||| |||||| || |||||||| |||| || ||| Sbjct 1333723 GATACTATTGATAATGTCAAAAGTAAAATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 1333664 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || |||||||| ||||| || |||| || | || |||||| Sbjct 1333663 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTTGTCTGACTATAAT 1333604 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || ||||||||||| || || |||||||| Sbjct 1333603 ATTCAAAAAGAATCAACTCTTCATTTAGT 1333575 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 111180 TTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGA 111239 ||| |||||||||||||| ||||| || | || || ||||||||||| | ||| || Sbjct 1334018 TTTCAAAATGCAAATTTTCGTCAAGACTTTAACTGGTAAAACCATTACTTTAGAAGTTGA 1333959 Query 111240 ACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGT 111299 | | ||| | ||| | || ||| ||| || || |||||||| |||| Sbjct 1333958 ATCATCTGATACAATTGATAATGTTAAATCAAAGATCCAAGATAAAGAAGGAATTCCACC 1333899 Query 111300 CGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 111359 ||||||||| | | || | || || || ||||| |||||| || |||| | | || Sbjct 1333898 AGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGA 1333839 Query 111360 TTATAATATACAAAAAGAATCTACACTACATTTAGTGTT 111398 || || || ||||||||||| || || |||||||| || Sbjct 1333838 CTACAACATTCAAAAAGAATCAACTCTTCATTTAGTCTT 1333800 >seq8 Length=720923 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 111190 CAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGAT 111249 ||||||||||||||||| | || || ||||| ||||| | ||| ||| || ||| Sbjct 254913 CAAATTTTTGTCAAAACTTTAACTGGTAAAACTATTACTTTAGAAGTTGAATCCTCTGAT 254854 Query 111250 TCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAA 111309 || ||| | || ||| ||||| || |||||||| |||| ||||||||| Sbjct 254853 ACTATTGATAACGTTAAAAGTAAAATCTAAGATAAAGAAGGTATTCCACCAGATCAACAA 254794 Query 111310 AGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATA 111369 | | |||| ||| || |||||||| |||||| | ||| | | ||||||||||| Sbjct 254793 CGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACCTTATCTGATTATAATATT 254734 Query 111370 CAAAAAGAATCTACACTACATTTAGT 111395 ||||||||||| || || |||||||| Sbjct 254733 CAAAAAGAATCAACTCTTCATTTAGT 254708 >seq1 Length=2713227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 111196 TTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTT 111255 ||||| ||||| | || || ||||| || || | ||| |||| | ||| | || Sbjct 1439428 TTTGTTAAAACCCTTACAGGTAAAACTATCACTTTAGAAGTGGAATCTTCTGATACCATT 1439369 Query 111256 GGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTT 111315 | | || ||| |||||| || |||||||| | || ||||||||||| | Sbjct 1439368 GATAATGTTAAATCCAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTA 1439309 Query 111316 ATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAA 111375 || | ||| || |||||||| |||||| | |||| | | |||||||| || |||||| Sbjct 1439308 ATCTTTGCTGGTAAACAATTAGAAGATGGAAGAACTTTATCTGATTATAACATTCAAAAA 1439249 Query 111376 GAATCTACACTACATTTAGTGTT 111398 ||||| || |||||||||| || Sbjct 1439248 GAATCAACTTTACATTTAGTTTT 1439226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039633938200