Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 150 3e-31 seq1 132 9e-26 seq10 127 4e-24 seq8 104 4e-17 >seq4 Length=1551466 Score = 150 bits (166), Expect = 3e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || || || || || |||||||| ||||| || || || | || || |||||| Sbjct 1333800 AAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCT 1333859 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| |||||||| || | | |||||| || |||||||| ||||| || ||| Sbjct 1333860 TCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCT 1333919 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||||| || || || || || || | |||||| ||||| || || |||||| Sbjct 1333920 TGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGTT 1333979 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||||||||||| || |||||| || Sbjct 1333980 TTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 1334015 Score = 140 bits (154), Expect = 6e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || || || || || |||||||| || |||||||| || | || || |||||| Sbjct 1333344 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCT 1333403 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || ||||| || || | | |||||| || |||||||| ||||| || ||| Sbjct 1333404 TCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCT 1333463 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| |||| || || || || || || | |||||| ||||||||||| |||||| Sbjct 1333464 TGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTT 1333523 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || || || || ||||| Sbjct 1333524 TTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || || || || ||||||||||| || |||||||| || | || || ||||||||| Sbjct 1333119 ACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCT 1333178 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || ||||| || || | | |||||| || || ||||| ||||| || |||||| Sbjct 1333179 AATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTGA 1333238 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||| || || || || || | |||||| ||||| || || || ||||| Sbjct 1333239 ATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTTA 1333298 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || || || || || ||||| Sbjct 1333299 CCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || || || || || |||||||| || ||||| || || | || || || |||||| Sbjct 1333575 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCTTCT 1333634 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | | ||||||||| || ||||| ||||| || |||||| Sbjct 1333635 AATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGA 1333694 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||| || || || |||| ||||||||||| || ||||| || || Sbjct 1333695 ATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCTTA 1333754 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||| || || ||||| Sbjct 1333755 CCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq1 Length=2713227 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || |||| || || |||||||| ||||||||||| || | || || |||||| Sbjct 1439226 AAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCT 1439285 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || || || || || | ||||||||| || ||||| || ||||| || ||| Sbjct 1439286 TCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 1439345 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| || | || || || ||||| || | ||||| ||||| || ||||| ||| Sbjct 1439346 TGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTT 1439405 Query 68430 TTTCCCGTGAGGGTCTTGACGAA 68452 || || || ||||| || || || Sbjct 1439406 TTACCTGTAAGGGTTTTAACAAA 1439428 >seq10 Length=718177 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || || |||| || || |||||||| || |||||||| || | ||| || |||||| Sbjct 468001 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCT 468060 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| || || || || || || | ||||||||| || |||||||| ||||| || ||| Sbjct 468061 TCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCT 468120 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| || || || || || || || | ||||| ||||| || || || ||| Sbjct 468121 TGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTT 468180 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||| || || || || |||||| Sbjct 468181 TTACCTGTTAAGGTTTTAACAAAAATTTGCATT 468213 >seq8 Length=720923 Score = 104 bits (114), Expect = 4e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || || || || || |||||||| || |||||||| || | || || ||||||||| Sbjct 254708 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCCATCTTCT 254767 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | | |||||| || |||||||| ||||| || |||| Sbjct 254768 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTAG 254827 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||| || || || || | ||||| ||||| || || || ||||| Sbjct 254828 ATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAATAGTTTTA 254887 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || || | || ||||| || || || ||||| Sbjct 254888 CCAGTTAAAGTTTTGACAAAAATTTG-ATTAT 254918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621582060120