Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 122 7e-23 seq1 116 3e-21 seq10 113 4e-20 seq8 105 6e-18 >seq4 Length=1551466 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| ||||||||||| | || |||||||||||||| || ||||| Sbjct 1333326 ATACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCA 1333385 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | | |||||| | |||||| || || | || | ||| ||||| || || Sbjct 1333386 GATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGT 1333445 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| |||||||| || ||| ||||| |||| | | |||| || || | ||||| Sbjct 1333446 GGAATTCCTTCTTTATCTTGAAT-TTTTGATTTAACATTATCAATAGTATCAGATGATTC 1333504 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || || | |||||| ||||| || ||||| Sbjct 1333505 AACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 114150 CAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209 ||| ||||||| | || ||| | ||||||||| | ||||| ||||||||||| || ||| Sbjct 1333095 CAATTACCGCCTCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAA 1333154 Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 || | || | | |||||| | |||||| || || | || | ||| ||||| || Sbjct 1333155 TCAGATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCA 1333214 Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329 |||||||| |||||||| || |||||| || | | |||| || || | ||| Sbjct 1333215 GGAGGAATACCTTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGAT 1333274 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || | || | ||||| || |||| |||||| |||||||| ||||| Sbjct 1333275 TCAACTTCTAAAGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||||| || |||||||| | || |||||||||||||||||||| || Sbjct 1333782 ATACCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCA 1333841 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | |||||| | ||| ||||| ||| |||| | ||| ||||| || || Sbjct 1333842 GATAAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGT 1333901 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || |||||| ||| | | |||| || || | ||||| Sbjct 1333902 GGAATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCA 1333961 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || | ||| || || ||||| ||||| Sbjct 1333962 ACTTCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 1334011 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | ||||||||| | || |||||||||||||| || || || Sbjct 1333554 ATACCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCA 1333613 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | ||||| | |||||||||||| | || | ||| |||||||| ||| Sbjct 1333614 GACAAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGA 1333673 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || ||| || ||| | | |||| || || | ||||| Sbjct 1333674 GGAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCT 1333733 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | || || |||||||| ||||| Sbjct 1333734 ACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq1 Length=2713227 Score = 116 bits (128), Expect = 3e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| || | || ||| ||||||||||||| || ||||||||||||||||| ||||| Sbjct 1439207 AATACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATC 1439266 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | ||| | |||||| | |||||||||||| |||| | | ||||| || || Sbjct 1439267 AGATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGG 1439326 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATT 114330 || || |||||||| || ||| ||| | |||| | | |||| ||| || | |||| Sbjct 1439327 TGGGATACCTTCTTTATCTTGAAT-TTTGGATTTAACATTATCAATGGTATCAGAAGATT 1439385 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | || || | || | ||||| || || || ||||| ||||| Sbjct 1439386 CCACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 >seq10 Length=718177 Score = 113 bits (124), Expect = 4e-20 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GC 114213 ||| || | || ||| ||||||||||||| || |||||||||||||| || ||||| | Sbjct 467985 ACCACCTCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGA 468044 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | || || | | |||||| | |||||||||||| | || | | ||||| || || | Sbjct 468045 TAAT-GTTCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTG 468103 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCG 114332 |||| |||||||| || ||| ||| ||||| | | |||| || || | ||||| Sbjct 468104 GAATACCTTCTTTATCTTGAAT-TTTACTTTTAACATTATCAATAGTATCAGAAGATTCA 468162 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || | ||||| |||||||| ||||| Sbjct 468163 ACTTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCAT 468212 >seq8 Length=720923 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 || |||| || | || ||| | ||||||||| | || |||||||||||||| || |||| Sbjct 254685 AATTACCTCCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAAT 254744 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | || | |||||| | |||||||||||| | || | ||| ||||| || | Sbjct 254745 CAGATAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTG 254804 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGAT 114329 | ||||| |||||||| || || ||| ||||| | | |||| || || | |||| Sbjct 254805 GTGGAATACCTTCTTTATCTTAGAT-TTTACTTTTAACGTTATCAATAGTATCAGAGGAT 254863 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTG 114379 || || || | || | ||||| || || | |||||| |||||||| || Sbjct 254864 TCAACTTCTAAAGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134036452452