Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 127 5e-24 seq8 122 2e-22 seq1 96.9 8e-15 seq10 87.8 4e-12 >seq4 Length=1551466 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | ||||| || ||||||||| ||||||||||| | Sbjct 1333557 CCACCTCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGAC 1333616 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || | ||||||||||||||||| || || || || | ||| ||||| ||| Sbjct 1333617 AAAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTG---GTCTGGA 1333673 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || ||||||||||| || ||||| ||| || || || |||| ||| |||||| Sbjct 1333674 GGAATACCTTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCT 1333733 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || || | |||||||| || || ||||| Sbjct 1333734 ACTTCTAAAGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 123 bits (136), Expect = 6e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || | ||||| || ||||||||| || || ||||| | Sbjct 1333785 CCACCTCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAT 1333844 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||||||||| || || |||||||| | ||| |||||| ||| Sbjct 1333845 AAAGTTCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGA 1333904 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||| ||||| || | ||| || || || || | ||| ||||| ||| Sbjct 1333905 ATTCCTTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACT 1333964 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || | || || || || || || | |||||||||||| || |||||| || Sbjct 1333965 TCTAAAGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTTTG 1334015 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| |||||||| || | | || | || ||||||||||||||||| || || Sbjct 1333364 TTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAA 1333423 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| ||| |||||| ||| |||||||||||||| || ||||| | ||| || || Sbjct 1333424 AATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTTGATTTAACATT 1333483 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| ||||| | || || || || || || | ||| || || Sbjct 1333484 ATCAATAGTATCAGATGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAAC 1333543 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 1333544 AAAGATTTGCAT 1333555 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | ||||| || |||||||| |||||||| || | | || | || Sbjct 1333112 TCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACC 1333171 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||||||||||||||||| || || |||| ||| |||||| | || || |||||||| Sbjct 1333172 ATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTT 1333231 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||| || || || | || || || || |||| ||| ||||| ||||| | || || Sbjct 1333232 ATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAAT 1333291 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||| ||| || || || || ||||| Sbjct 1333292 TGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 >seq8 Length=720923 Score = 122 bits (134), Expect = 2e-22 Identities = 161/222 (73%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | ||||| || ||||||||| |||||||| || | | || | ||| Sbjct 254701 TCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCC 254760 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||||||||||| || || || |||| ||| |||||| ||| || |||||||| Sbjct 254761 ATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTT 254820 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 ||| | |||||| ||| ||||| || |||| ||| ||||| ||||| | || || Sbjct 254821 ATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAAT 254880 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || || || || | ||| ||||| || || || ||||| || Sbjct 254881 AGTTTTACCAGTTAAAGTTTTGACAAAAATTTG-ATTATATT 254921 >seq1 Length=2713227 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || ||||| || | | || | ||| |||||||||||||| || || || Sbjct 1439246 TTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCTTCTAATTGTTTACCAGCAAA 1439305 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| |||||| ||||||||||| || ||||| | ||| || || Sbjct 1439306 GATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTGGATTTAACATT 1439365 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | ||||| || || || || || || || || Sbjct 1439366 ATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGTTTTACCTGTAAGGGTTTTAAC 1439425 Query 288462 GAA 288464 || Sbjct 1439426 AAA 1439428 >seq10 Length=718177 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| |||||||| || | | || | || |||||||||||||| || || || Sbjct 468021 TTCTTTTTGAATATTATAATCAGATAATGTTCTACCATCTTCTAATTGTTTACCAGCAAA 468080 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | | |||||| ||| || ||||||||||| || ||||| ||| || || Sbjct 468081 AATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTACTTTTAACATT 468140 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| ||||| | || || || || || || | || || || Sbjct 468141 ATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATTGTTTTACCTGTTAAGGTTTTAAC 468200 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 468201 AAAAATTTGCATT 468213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653326883138