Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq1 91.5 1e-13 >seq4 Length=1551466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| || |||||||| || ||||| || ||| | ||| || Sbjct 1333574 AACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCTTC 1333633 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | | |||| ||| |||||||| ||||| ||||||||||| || | Sbjct 1333634 TAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATC-TT 1333692 Query 138525 GATTTTTTGTTTT-AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| |||| | | || | || || | || || || || | || | || | Sbjct 1333693 GAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCT 1333752 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| | || || |||||||| ||||| Sbjct 1333753 TACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 || |||||||| | |||| || ||||||||||||||||| | ||| | || Sbjct 1333800 AAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCT 1333859 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||||| |||||| ||| ||||| || || || || |||||||| || Sbjct 1333860 TCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCT 1333919 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 ||| ||| ||| | | || | || || | || || || || | || | ||| Sbjct 1333920 TGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTAATGGTT 1333979 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| | ||| || || ||||| ||||| Sbjct 1333980 TTACCAGTTAAAGTCTTGACGAAAATTTGCAT 1334011 >seq1 Length=2713227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||||| |||| || ||||||||||| || || | ||| | || Sbjct 1439226 AAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCATCT 1439285 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | |||||| | ||||| || || || ||||||||||| || Sbjct 1439286 TCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATC- 1439344 Query 138523 GTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | || | ||| || | || ||||| || | || | || Sbjct 1439345 TTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATAGT 1439404 Query 138582 TTTACCAGTCAGAGTTTTTACAAA 138605 |||||| || || ||||| ||||| Sbjct 1439405 TTTACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261959567120