Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 149 6e-31 seq10 136 4e-27 seq8 132 4e-26 seq1 105 6e-18 >seq4 Length=1551466 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||| || |||||||| ||||| ||||||||||| | |||| || | Sbjct 1333341 CTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTACCA 1333400 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||||||||| || | ||||| ||||| || || || ||||| ||||||||| Sbjct 1333401 TCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTA 1333460 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||||||| ||| | || | || || || || || ||||| | |||| Sbjct 1333461 TCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAAGGTAATG 1333520 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| |||||| ||||| |||||||| Sbjct 1333521 GTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||| || || || || ||||| ||||||||||| | |||| || ||| || Sbjct 1333119 ACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACCATCTTCT 1333178 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||||||||| || | ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 1333179 AATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTTATCTTGA 1333238 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | || | || || || || || ||||| | ||||| ||||| Sbjct 1333239 ATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAATTGTTTTA 1333298 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||||| |||||||||||||| Sbjct 1333299 CCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||| || |||||||| ||||| |||||||| || | ||| || || || Sbjct 1333575 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACCGTCTTCT 1333634 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 |||||||| || || | || || ||||| ||||| || ||||| ||||||||||||||| Sbjct 1333635 AATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGA 1333694 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| ||||| || | || || ||||| || ||||| | ||| | || || Sbjct 1333695 ATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGATTGTCTTA 1333754 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||| || || |||||||||||||| Sbjct 1333755 CCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || || || |||| ||| || |||||||| ||||| || || || || | ||| || Sbjct 1333794 AGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTA 1333853 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| || ||||| || || ||| | || || ||||| || || || ||||| |||||| Sbjct 1333854 CCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCCTTCT 1333913 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 |||||||| || ||| ||| | || | || || || || || ||||| | |||| Sbjct 1333914 TTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAAAGTA 1333973 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || |||| ||| || || ||||||||||| Sbjct 1333974 ATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCAT 1334011 >seq10 Length=718177 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||| | |||||||| ||||| ||||||||||| | ||| || | Sbjct 467998 CTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGTTCTACCA 468057 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || |||| ||| || || || ||||| ||||||||| Sbjct 468058 TCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTA 468117 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||||||||| ||| | || | || || ||||| || ||||| | ||||| Sbjct 468118 TCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAAAGTAATT 468177 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| ||||| |||||||||||||| Sbjct 468178 GTTTTACCTGTTAAGGTTTTAACAAAAATTTGCAT 468212 >seq8 Length=720923 Score = 132 bits (146), Expect = 4e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||| || |||||||| ||||| ||||||||||| | |||| | ||| || Sbjct 254708 ACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGTTCTTCCATCTTCT 254767 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 |||||||| || || | ||||| ||||| || || || ||||| ||||||||||||| | Sbjct 254768 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTT-A 254826 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 |||| ||| | || | || | || || || || || ||||| | ||||| ||||| Sbjct 254827 GATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAAAGTAATAGTTTT 254886 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTG 45337 || |||| |||||| ||||||||||| Sbjct 254887 ACCAGTTAAAGTTTTGACAAAAATTTG 254913 >seq1 Length=2713227 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || |||| ||| | |||||||| ||||| || |||||||| | ||| | | Sbjct 1439223 CTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGTTCTTCCA 1439282 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | || |||| ||| || || || || || ||||||||| Sbjct 1439283 TCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTA 1439342 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||||||||| ||| | || | ||| || ||||| || ||||| | ||| | Sbjct 1439343 TCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAAAGTGATA 1439402 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 ||||| || || || ||||| ||||| Sbjct 1439403 GTTTTACCTGTAAGGGTTTTAACAAA 1439428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002798847160