Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 116 9e-21 >seq4 Length=1551466 Score = 116 bits (128), Expect = 9e-21 Identities = 163/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| | ||| | || ||||| || || ||||| | ||||||||||| ||||| Sbjct 1333790 TCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGT 1333849 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || |||||||| | ||||| ||||||||||| | ||| || || || || |||||| Sbjct 1333850 TCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCC 1333909 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || |||||| || || || | || || | || ||| || || || Sbjct 1333910 TTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAA 1333969 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || ||||| || | ||| || || |||||||| |||||| Sbjct 1333970 AGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTG---CATTTT 1334014 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | || || || ||||| ||||| | || || |||| || || || || Sbjct 1333112 TCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGTTCTACC 1333171 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | || |||||||| || || | ||| || || || ||| ||| |||||| Sbjct 1333172 ATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACCTTCTTT 1333231 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | || || | || ||| || || || || || Sbjct 1333232 ATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAAAGTAAT 1333291 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | |||||| ||||||||||| Sbjct 1333292 TGTTTTACCTGTCAAAGTTTTAACAAAAATTTG 1333324 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || || | || ||||| || || ||||| | || ||||||| |||||| || || Sbjct 1333568 TCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGTTCTACC 1333627 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||| | || || || || || || | ||| || ||||| ||| ||| |||||| Sbjct 1333628 GTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACCTTCTTT 1333687 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| || || || || | || |||| | |||||| || || ||||| Sbjct 1333688 ATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAAAGTGAT 1333747 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || ||||||||||| Sbjct 1333748 TGTCTTACCAGTTAAGGTCTTGACAAAAATTTG 1333780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920527549757