Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 >seq3 Length=2066014 Score = 138 bits (152), Expect = 1e-27 Identities = 602/945 (64%), Gaps = 17/945 (2%) Strand=Plus/Minus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | ||||| ||||| || |||| || |||||||| |||||| ||| ||||| Sbjct 1415032 CCAACATTATTCAATGCTGGAACTCCAAAGCCGCAAATGTCTTCTTGTTTTCTTGTTGCA 1414973 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | ||||| |||||||| ||||| || | || ||| | ||||| ||| || ||| Sbjct 1414972 ATGAAGGATGATTCAATAAATGGTATATTCGATACTTTGTCTGAAATGGCCGTTATTTCA 1414913 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATT 111899 || ||||||||||| || | || || ||| || ||||||| | | || |||| Sbjct 1414912 AAACATGCTGGTGGTATAGGTTTACATATTCATAATATCAGAGCAACCGGTTCATATATT 1414853 Query 111900 AGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 111959 |||||| |||||| || |||||||||| |||||| | | ||||| || || Sbjct 1414852 GCAGGTACTAATGGTACTTCCAATGGTATTATCCCAATGTTAAGAGTATTCAATATGACT 1414793 Query 111960 GCGCGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 || | ||||| | |||| ||| | || || | | ||| |||||||||| Sbjct 1414792 GCAAGATATGTTGATCAAGGTGGTAATAAACGTCCTGGTGCCTTTGCAATCTATCTTGAA 1414733 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 |||||||| || || || | || || |||| | | || || ||| | || ||| Sbjct 1414732 CCATGGCATGCTGACATTTTTGATTTTATTGATATTAGAAAAAATCATGGTAAAGAAGAG 1414673 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | ||| | || | ||||| ||||| || ||| | || ||||| |||||| Sbjct 1414672 ATTAGAGCAAGAGATTTATTTCCTGCTCTTTGGATCCCGGATTTATTTATGAAAAGAGTT 1414613 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 || | | ||||| | | |||| |||| | | | || ||| | ||| Sbjct 1414612 GAAAAAAACCTTGATTGGCCATTATTTTCTCCAAATGAAGTTCCTGGTTTAAGTGATTGT 1414553 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGG---GCGACT 112253 || || || |||||| || | | | | | ||| ||| | || || | Sbjct 1414552 TATGGAGATGAATTTGAAAAACTAT---TTGAATCCTATGAAAAAAATGGGAAAGCTATA 1414496 Query 112254 GCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 || |||| | | ||| || ||| | | ||||||| || | ||| Sbjct 1414495 AAAGTTGTTAAAGCTCAAAAGTTATGGTCTGCAATTTTAGAAGCTCAAACTGAATCCGGT 1414436 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 || || | ||| |||| ||||| || || || |||| ||||||||||||||| | ||| Sbjct 1414435 ACTCCTTTCATGGTTTATAAAGATGCTTGCAATAAAAAAAGTAATCAAAAGAATCTTGGT 1414376 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 |||||||| ||| || || || ||||| | || | | |||| | || || Sbjct 1414375 GTGATCAAATCTTCTAATCTTTGCTGTGAAATAGTTGAGTATTCAGATGCCCAAGAAACT 1414316 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GA-CAAAGA 112491 ||||| ||||| | || || | || || || | ||| | | ||| || || || Sbjct 1414315 GCTGTTTGTAATTTAGCTTCTCTTGCCCTTCCAGCATTTGTTCAACAAGATGATCATAGT 1414256 Query 112492 CATT----TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAAC 112547 || ||||| ||| ||| | || ||| | | ||| | | |||| ||| || | Sbjct 1414255 TGTTGGTATGATTTTGATAAATTGCATGAAATAGCCAAAGTTTTAACAAGAAATCTTGAT 1414196 Query 112548 AGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACA 112606 | ||||||||| | || ||||| || ||| ||| || | ||||||||||| | | Sbjct 1414195 CGCGTTATTGATCGTAACTTTTATCCAGTTCCAGA-AGCAAAAAGATCTAATATGAAAAA 1414137 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651 | ||||||| | | ||||| |||||| | || ||| ||| || Sbjct 1414136 TAGGCCAATTGCTTTAGGTGTTCAAGGTTTAGCAGATACATTTAT 1414092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741849091120