Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-22 >seq3 Length=2066014 Score = 122 bits (134), Expect = 1e-22 Identities = 282/423 (67%), Gaps = 8/423 (2%) Strand=Plus/Plus Query 106196 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 106255 |||||||| || ||||| || || || ||||| || ||||| |||||||| Sbjct 1414017 GCGTGATAAATTGTTTCGAAAATTTGAATATTCAAAATTTTAGCTTCTGAAGAATCAAAA 1414076 Query 106256 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 106315 | | | ||| |||||| ||| || | |||||||||||| ||| |||| || || Sbjct 1414077 GGTAATCTTAACATCATAAATGTATCTGCTAAACCTTGAACACCTAAAGCAATTGGCCTA 1414136 Query 106316 TGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGACTCG 106374 | | ||||||||| || || ||| ||| |||||||| || | ||||| || || Sbjct 1414137 TTTTTCATATTAGATCTTTTTGC-TTCTGGAACTGGATAAAAGTTACGATCAATAACGCG 1414195 Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC------AAA 106428 | |||||| | || | || || | |||||||| | ||| ||| |||| | | Sbjct 1414196 ATCAAGATTTCTTGTTAAAACTTTGGCTATTTCATGCAATTTATCAAAATCATACCAACA 1414255 Query 106429 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 106488 | | || |||| | ||| | ||||||||| | || || ||||| |||||||| Sbjct 1414256 ACTATGATCATCTTGTTGAACAAATGCTGGAAGGGCAAGAGAAGCTAAATTACAAACAGC 1414315 Query 106489 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGT 106548 || || | ||||| ||||| | ||||| || | || ||| || ||| Sbjct 1414316 AGTTTCTTGGGCATCTGAATACTCAACTATTTCACAGCAAAGATTAGAAGATTTGATCAC 1414375 Query 106549 CCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 106608 || | ||||||||| ||||| ||||| ||||| ||||| || || | |||| | || || Sbjct 1414376 ACCAAGATTCTTTTGATTACTTTTTTTATTGCAAGCATCTTTATAAACCATGAAAGGAGT 1414435 Query 106609 CCC 106611 || Sbjct 1414436 ACC 1414438 Score = 87.8 bits (96), Expect = 2e-12 Identities = 282/437 (65%), Gaps = 3/437 (1%) Strand=Plus/Plus Query 106784 TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGA 106843 ||||| | ||||| || | || || ||||| || | | ||| | |||||| | | Sbjct 1414611 TCAACTCTTTTCATAAATAAATCCGGGATCCAAAGAGCAGGAAATAAATCTCTTGCTCTA 1414670 Query 106844 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 106903 |||||| | ||| || || || | |||| || || | || || || |||||| Sbjct 1414671 ATCTCTTCTTTACCATGATTTTTTCTAATATCAATAAAATCAAAAATGTCAGCATGCCAT 1414730 Query 106904 GGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGC 106960 || |||||||||| ||| | | || || | ||| |||||| ||||| | Sbjct 1414731 GGTTCAAGATAGATTGCAAAGGCACCAGGACGTTTATTACCACCTTGATCAACATATCTT 1414790 Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020 || || || ||||| | | |||||| |||||||||| || |||||| || || Sbjct 1414791 GCAGTCATATTGAATACTCTTAACATTGGGATAATACCATTGGAAGTACCATTAGTACCT 1414850 Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 |||| || | ||||| | || ||| || || | || ||||| ||||| Sbjct 1414851 GCAATATATGAACCGGTTGCTCTGATATTATGAATATGTAAACCTATACCACCAGCATGT 1414910 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 ||||| || || || | | ||| | | ||||| || ||||| || ||||| Sbjct 1414911 TTTGAAATAACGGCCATTTCAGACAAAGTATCGAATATACCATTTATTGAATCATCCTTC 1414970 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 | || | ||| || ||| ||||| ||||| |||| || ||||||||||| | ||| Sbjct 1414971 ATTGCAACAAGAAAACAAGAAGACATTTGCGGCTTTGGAGTTCCAGCATTGAATAATGTT 1415030 Query 107201 GGTGTTGCGTGAATGAA 107217 || | || ||| |||| Sbjct 1415031 GGAGAAGCATGAGTGAA 1415047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980276392040