Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=2713227 Score = 95.1 bits (104), Expect = 1e-14 Identities = 197/289 (68%), Gaps = 11/289 (4%) Strand=Plus/Minus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 || ||||| | | ||| ||||| || ||||||||||| |||||||||||||| | Sbjct 233948 CCTGAAATGTTAGGTGGTAGAGTTAAAACTTTACATCCTGCTGTTCATGGTGGTATTTTA 233889 Query 151039 GCACAACGAGGTA-ATTCTAGTC---ATGATTTAGATCTTAAGGTAAATCGTATTGAACC 151094 || | || || ||||| | | |||||| | || ||||| | | || Sbjct 233888 TCAAGA-GATATAGATTCTGATTTAAAAGATTTAAAA---AATTTAAATATAAATAAA-- 233835 Query 151095 GATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGT 151154 |||||| | |||| | || ||||||| ||||||||||| || |||| || | ||| Sbjct 233834 -ATTGATTTAGTTGTTTGTAATTTATATCCTTTTAAAGAAACAATTTCTAAGCCTGATGT 233776 Query 151155 AACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCAGC 151214 |||| ||| || |||||||| | ||||| ||||||||| || | | ||||| | || Sbjct 233775 AACTATTGATGATGCAATTGAACAAATTGATATTGGTGGTGTTACTTTATTAAGAGCTGC 233716 Query 151215 AGCAAAGAATTATAAACATGTTGCTGTGTTAACTAATCCAAATCAGTAT 151263 || || ||| ||||| ||| | | | || |||||||| | ||| Sbjct 233715 TGCTAAAAATCATAAAAGAGTTTCAATTGTTTCTGATCCAAATGATTAT 233667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847482722400