Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4 161 2e-34 seq10 147 5e-30 seq1 136 9e-27 seq8 134 3e-26 >seq4 Length=1551466 Score = 161 bits (178), Expect = 2e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| || || | |||||||| || ||||||||||| ||||| || | | ||| Sbjct 1333790 TCTAAGTCTTAAGACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCAGATAAAGT 1333849 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | |||||||| ||||| ||||| || Sbjct 1333850 TCTACCATCTTCTAATTGCTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGAATTCC 1333909 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| || ||| || || || ||||| || || || ||| ||||| | Sbjct 1333910 TTCTTTATCTTGGATCTTTGATTTAACATTATCAATTGTATCAGATGATTCAACTTCTAA 1333969 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| || || || || ||||| || ||||| | |||||||| Sbjct 1333970 AGTAATGGTTTTACCAGTTAAAGTCTTGACGAAAATTTGCATTT 1334013 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | |||||||| || |||||||||||||| ||||| | | || Sbjct 1333334 TCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGT 1333393 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || || || || || || | |||||||| ||||| ||||| || Sbjct 1333394 TCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCC 1333453 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||||||| || || || ||||| || || || ||| ||||| | Sbjct 1333454 TTCTTTATCTTGAATTTTTGATTTAACATTATCAATAGTATCAGATGATTCAACTTCCAA 1333513 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || || |||||||| || || | |||||| Sbjct 1333514 GGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1333555 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | ||||| || ||||||||||||||||| ||||| | | || Sbjct 1333106 TCTTAATCTAAGAACTAAATGAAGTGTAGACTCTTTTTGAATATTATAATCAGATAAGGT 1333165 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || || || || || || | |||||||| || |||||||| || Sbjct 1333166 TCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCAGGAGGAATACC 1333225 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||||||| || ||| || || ||||| || || || ||| ||||| | Sbjct 1333226 TTCTTTATCTTGAATCTTGGACTTAACATTATCAATAGTATCAGATGATTCAACTTCTAA 1333285 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || |||||||||||||| || || | |||||| Sbjct 1333286 AGTAATTGTTTTACCTGTCAAAGTTTTAACAAAAATTTGCAT 1333327 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | |||||||| || |||||||||||||| || || | | ||| Sbjct 1333562 TCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCAGACAAAGT 1333621 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || || || | |||||||||||||||||||| || Sbjct 1333622 TCTACCGTCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGGTCTGGAGGAATACC 1333681 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| ||||| || ||||| || || ||| ||| ||||| | Sbjct 1333682 TTCTTTATCTTGAATTTTACTTTTGACATTATCAATAGTATCTGAAGATTCTACTTCTAA 1333741 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || || || || || || | |||||| Sbjct 1333742 AGTGATTGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 1333783 >seq10 Length=718177 Score = 147 bits (162), Expect = 5e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || | ||| || |||||||||||||| ||||| | | || Sbjct 467991 TCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGATAATGT 468050 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || || || | || |||||| ||||| ||||| || Sbjct 468051 TCTACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACC 468110 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| || || || ||||| || || ||| ||| ||||| | Sbjct 468111 TTCTTTATCTTGAATTTTACTTTTAACATTATCAATAGTATCAGAAGATTCAACTTCTAA 468170 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| || || ||||| || ||||| || || | |||||||| Sbjct 468171 AGTAATTGTTTTACCTGTTAAGGTTTTAACAAAAATTTGCATTT 468214 >seq1 Length=2713227 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || | ||| || ||||||||||| || ||||| | | ||| Sbjct 1439216 TCTTAATCTTAAAACTAAATGTAAAGTTGATTCTTTTTGAATGTTATAATCAGATAAAGT 1439275 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || |||||| ||||| || || || Sbjct 1439276 TCTTCCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACC 1439335 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| || || || |||||||| || ||| ||||||||| | Sbjct 1439336 TTCTTTATCTTGAATTTTGGATTTAACATTATCAATGGTATCAGAAGATTCCACTTCTAA 1439395 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | || || ||||| | ||||| || || Sbjct 1439396 AGTGATAGTTTTACCTGTAAGGGTTTTAACAAA 1439428 >seq8 Length=720923 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | |||||||| || |||||||||||||| ||||| | | || Sbjct 254695 TCTTAATCTAAGAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGATAAGGT 254754 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || || || | |||||||| ||||| ||||| || Sbjct 254755 TCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATACC 254814 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||| ||||| || ||||| ||||| || || || ||| ||||| | Sbjct 254815 TTCTTTATCTTAGATTTTACTTTTAACGTTATCAATAGTATCAGAGGATTCAACTTCTAA 254874 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTG 195137 |||| || || || || |||||||| || || | ||| Sbjct 254875 AGTAATAGTTTTACCAGTTAAAGTTTTGACAAAAATTTG 254913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480590718457