Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 1e-11 >seq4 Length=1551466 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || || || || ||||| || |||| || |||||| ||||| ||||| || || Sbjct 1333329 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAT 1333388 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| || | |||||||||||||| || | ||||| || ||| | || Sbjct 1333389 AAGGTTCTACCATCTTCTAATTGTTTTCCGGCAAAAATCAAACGTTGTTGATCTGGTGGA 1333448 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || || || || ||| || ||| || || |||| || ||| | || Sbjct 1333449 ATTCCTTCTTTATCTTGAATTTTTGATTTAAC--AT--TATCAATAGTATCAGATGATTC 1333504 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| || | ||| |||||||| || || | ||| || |||||||| |||||| Sbjct 1333505 AACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCATA 1333556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633319090488