Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq5 107 3e-18 >seq5 Length=1213637 Score = 107 bits (118), Expect = 3e-18 Identities = 423/645 (66%), Gaps = 43/645 (7%) Strand=Plus/Plus Query 126568 TTAAAATTGTTATTGGTCAATTACGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA- 126626 ||||| || | || | ||| | | | ||||||| ||||||| ||||||| ||| || Sbjct 902976 TTAAACTTTTAATGAGACAAACAAGAAGACCAGAACTTGGAGATAAATTTTCTTCAAGAC 903035 Query 126627 ATGGCCCAAAAAGGAACTTGTGGTATGATTTATGCA-CAAGAAGATATGCCGTTTACACA 126685 |||| | |||||||| ||||||||| ||| || | ||||||||| | || |||| | Sbjct 903036 ATGGAC-AAAAAGGAGTTTGTGGTATAATT-ATAAATCAAGAAGATTTACCATTTA-ATG 903092 Query 126686 ATCA-GGTATGACCCCCGATATTATAATTAATCCAAATTGTATACCGTCAAGAATGACCA 126744 || | ||||| | || |||||||| || |||||| || || | || ||| | ||||| Sbjct 903093 ATGATGGTATATCACCAGATATTATTATGAATCCACATGGTTTTCCATCACGTATGACAG 903152 Query 126745 TAAATCAAATAATTGCAACTGTTATG-GGTAAATTATACCTAACGAATCCACAATCAAAA 126803 | | |||| ||| || | ||| |||||| | | |||| || | || Sbjct 903153 TTGGTAAAATGCTTG-AATTAATATCAGGTAAAGCAGGGGTTTTGAATGGTACATTAGAA 903211 Query 126804 TTCAAACAAGGTAATCCAT-TTATGGAGAATTCAA----GCAC-TATTTTAAATGAATTA 126857 | | |||| ||| || ||||| || || | | ||| | ||| |||| Sbjct 903212 T------ATGGTA---CATGTTTTGGAGGATCAAAATTAGAAGATATGTCAAA--AATTT 903260 Query 126858 TGCGATGAACTTACAAAACATGGATTTGACTCAACAGGAGGAGAAACAATGTATTGTGGT 126917 | || | | ||| |||||| | |||| ||| | | |||| ||| Sbjct 903261 T------AATTGATAAA----GGATTTAGTTATTCAGGTAAAGATCAATTATATTCAGGT 903310 Query 126918 TTTACTGGAAGAAGGATAAAGAGTAAA-ATTTTTATAGGTCCAACATACTATCATCGTCT 126976 |||||||| ||| | | | || | | || ||| | || |||| || ||||| | Sbjct 903311 ATTACTGGA-GAATGTTTACAAGCATATATATTTTTTGGGCCAATTTATTATCAAAAATT 903369 Query 126977 TAAACATATGGTTAAAGATAAAATGCATGCTAGA---AGTCATGGTCAAGTAACAACATT 127033 ||||||||||||| ||||| |||||||| ||| || | | |||| | || || Sbjct 903370 AAAACATATGGTTATGGATAAGATGCATGCAAGAGCAAG--AGGACCAAG-AGCAGTTTT 903426 Query 127034 ACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGA 127093 | | ||||||| ||| | || ||| ||||||||||| ||||||||||| Sbjct 903427 AACAAGACAACCAACAGAAGGTAGAAGTAGAGATGGAGGATTAAGATTAGGAGAAATGGA 903486 Query 127094 AAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGAATGTTTTTATG 127153 || ||||||| || | | ||||||| ||||||| ||| |||||| | | |||| Sbjct 903487 AAGAGATTGTGTTATAGCATATGGAGCATCACAATTATTATTAGAAAGATTAATGTTATC 903546 Query 127154 TTCAGATCCTTTTCAAATTGATGTGTGTACAAATTGTGGAATGAT 127198 |||||| |||| | ||||||| |||| || |||||| |||| Sbjct 903547 ATCAGATGTTTTTGATGTTGATGTTTGTAATAAATGTGGATTGAT 903591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658402615667160