Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq15 590 7e-164 seq3 515 4e-141 >seq15 Length=386167 Score = 590 bits (654), Expect = 7e-164 Identities = 679/910 (75%), Gaps = 5/910 (1%) Strand=Plus/Minus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 ||||||||| || | |||||||||||||| ||||||||||| || |||| || ||| Sbjct 129423 TTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGCTAAAGAAATATT 129364 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||||||||||||||||||| | |||||||| | |||||| ||||| | | || Sbjct 129363 TTCCATAAAATCAAATGGATTTGTAACATTATAAAATTTTTTATTACCTAAAGCAACTAA 129304 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 || |||||| || ||||||| || |||| ||| | | ||||||||| |||| ||| Sbjct 129303 TAATCTATCTGCAACAAATTCAACATATTGACACATTAATTTACAATTCATACCTAATAA 129244 Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 | |||||| ||||| |||| | | |||| ||| |||| || || || | ||||| Sbjct 129243 AGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATATCAACAGCTTCAGTAATAAT 129184 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||| | | ||| || | | | ||| ||| | ||||| ||||| Sbjct 129183 TTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAGAAAATAATAAACAAGCAAA 129124 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 |||| ||| || || || ||||||| || |||||||| |||||||||||||| ||||| Sbjct 129123 ATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTGAAAATGTTAAACCTGGCAT 129064 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 | ||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||| Sbjct 129063 TAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATCCAGAGAAGAAAATACCTTC 129004 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 || || ||||||||||||| |||||| |||| ||||||||||| || ||||||| | Sbjct 129003 AACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCATCATTATCATTAATCCATCT 128944 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 | ||||| ||||| || | ||| | |||||| ||||| || || | |||||||| | | Sbjct 128943 TAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTTCAATTGCATTAAATAAAAA 128884 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 || || | || |||||||| ||| | ||||| |||||| || |||| ||||| Sbjct 128883 TTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATAAAGAATAAGTTTCAGAATG 128824 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 ||||||||| || || ||||| || ||||||||| | ||||| | || || ||||| Sbjct 128823 AATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAGCTTCAGGAATTTGAACTTC 128764 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | |||| |||| || |||||||||||||| || |||||| ||||||||||||||| Sbjct 128763 TGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCATCAGAAGCTGCAAAAAATGC 128704 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA---TGTATTCCAATCATTAAT 19445 ||| || | ||||||| | |||||| | |||| |||||||||||| | Sbjct 128703 TAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAACGATTATTCCAATCATGTAA 128644 Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505 ||||||| |||||| | |||||| | |||||||| ||||| || |||||||||||||| Sbjct 128643 ATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCTTTTTTATACAT 128584 Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTT-CTTTAA 19564 | ||| || ||| |||||| || ||||||| |||||| | | |||||||| | |||| Sbjct 128583 TTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAAACGACGTTTATTTTCCATTAA 128524 Query 19565 GAATAGGTTC 19574 || |||||| Sbjct 128523 TAA-AGGTTC 128515 >seq3 Length=2066014 Score = 515 bits (570), Expect = 4e-141 Identities = 1476/2254 (65%), Gaps = 70/2254 (3%) Strand=Plus/Plus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| || |||| |||||| ||||||||||| || |||||| |||| ||||||||| Sbjct 1413399 GCTGCTTGAGTTCTTAAATAGTACATACCAGTTTTCAAACCTTTTTTCCAACCATAGAAA 1413458 Query 47064 TGCATACTAGTTAA-TTTAGAATAACTAG-GTTCTGAAATATGAATATTAAGAGATTGAC 47121 ||||||||||| || ||| || | | | ||| |||| ||||||| | |||||| Sbjct 1413459 TGCATACTAGTCAACTTTCCCATTGTTGGAGCTCTTAAAT--GAATATTTAATGATTGAG 1413516 Query 47122 TCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCT 47181 ||||| || || ||||| ||||| |||| |||||| | |||| |||| | | | Sbjct 1413517 ATTGATCGATGAAAGCACCCCTATCGGCTGACATATCAACAATAGTTTTTTGAGAGAGTT 1413576 Query 47182 CCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAG 47238 |||| ||||| || || | | |||||| | | ||| | | || | | | |||||| | Sbjct 1413577 CCCAGACTGTCTTGTATAAATCTTTAATTTTCTTTGGAATGTTTGGCAAGTGTTGAATTG 1413636 Query 47239 ATCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgtt--cagt 47296 | || ||| |||||| | || | | |||| ||||| || | || || | Sbjct 1413637 AACCGTTATTTGAAATAATTGACTCCTTCATTGCATTAGACCATAGACC-CATTGCCACT 1413695 Query 47297 taatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCT 47356 ||| ||| | || || |||||||| |||||||| || || | | || | ||| Sbjct 1413696 AAATCCTTTAACAA-ATATGGATTAACTATTTGAAACTCACCTGCCAAAACACGACGCGA 1413754 Query 47357 ATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGA 47416 ||| |||||| ||||| ||||| | |||| |||| |||| |||||||| |||||| Sbjct 1413755 ATAAATATTAGAGGTATAAGGTTCAAAGCATTCGTTATAACCAAGAATTTGAGAAGTTGA 1413814 Query 47417 TGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNN 47476 || || ||||| | || |||||||| |||||||| |||| |||| || || Sbjct 1413815 AGCAGTTGGCATAGGAGCGACTAATAAAGAATTTCTTAAACCATGTTTTC-TAACTTTTG 1413873 Query 47477 NNNNNNNNGTTTCCAA-TCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAA 47535 ||| | ||||| | | || || | ||||| ||| || | Sbjct 1413874 CTTTTAATTCTTCGTAGTCCCATAATTGAGAAGGTTTTCTTTCCCAAAGGTCAGGCTGTA 1413933 Query 47536 GAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGA 47595 ||| |||||| | ||||| || ||| |||| ||| | || || ||| | Sbjct 1413934 AAATACCTTTAGATGCAGGAGATCCTGAATAGGTTTCATATGTTCCCAATTCAGAAGCAA 1413993 Query 47596 GTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGAT 47655 ||||| | ||||| | |||| | ||| |||||||| || |||| || || | | Sbjct 1413994 GTTCAGTAGAAGCTTCAACTGCAGCGTGATAAATTGTTTCGAAAATTTGAATATTCAAAA 1414053 Query 47656 TCCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTT 47715 | | |||||||| || |||||||| | ||||||||||| || |||| Sbjct 1414054 TTTTAGCTTCTGAAGAATCAAAAGGTAATCTTAACATCATAAATGTATCTGCTAAACCTT 1414113 Query 47716 GAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGAT 47775 ||||||| | | ||||||| |||| | ||||||| | |||||||| | ||||| Sbjct 1414114 GAACACCTAAAGCAATTGGCCTATTTTTCATATTAGATCTTTTTGCTTCTGGAACTGGAT 1414173 Query 47776 ATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTA 47835 | ||| ||| |||| || ||| | ||||| | Sbjct 1414174 AAAAGTTACGATCAATAACGCGATCAAGATTTCTTGTTAAAACTTTGGCTATTTCATGCA 1414233 Query 47836 ATTTATTAAAATCA-------AACT-TGTT-AT-TTAT--AACAAACCTATTAAGTGCTA 47883 |||||| ||||||| |||| || | || || | |||||| ||| || | Sbjct 1414234 ATTTATCAAAATCATACCAACAACTATGATCATCTTGTTGAACAAATGCTGGAAGGGCAA 1414293 Query 47884 TAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCAC 47943 ||| |||| |||||| ||||| || | | || | ||| | | ||||||| | Sbjct 1414294 GAGAAGCTAAATTACAAACAGCAGTTTCTTGGGCATCTGAATACTCAACTATTTCACAGC 1414353 Query 47944 ATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGT 48003 | |||||| | ||||||| ||| | ||| | |||||| | || || || || | Sbjct 1414354 AAAGATTAGAAGATTTGATCACACCAAGATTCTTTTGATTACTTTTTTTATTGCAAGCAT 1414413 Query 48004 CCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAA 48063 | || |||| ||| ||||| || || | ||| | |||| ||| | || | ||| | Sbjct 1414414 CTTTATAAACCATGAAAGGAGTACCGGATTCAGTTTGAGCTTCTAAAATTGCAGACCATA 1414473 Query 48064 CAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACT 48123 | ||| || | ||| | ||||||| || | ||| || | ||| | Sbjct 1414474 ACTTTTGAGCTTTAACAACTTTTATAGCTTTCCCATTTTTTTCATAGGATTCAAATAGTT 1414533 Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATG 48183 | ||||||||||| ||||| || | ||| |||||| |||||| ||| | | |||| Sbjct 1414534 TTTCAAATTCATCTCCATAACAATCACTTAAACCAGGAACTTCATTTGGAGAAAATAATG 1414593 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243 |||||| | |||| ||||| ||||||||| ||| || ||||||||||| || Sbjct 1414594 GCCAATCAAGGTTTTTTTCAACTCTTTTCATAAATAAATCCGGGATCCAAAGAGCAGGAA 1414653 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 ||||||| || | ||| | ||||| || ||| ||| || ||| |||| ||| || | Sbjct 1414654 ATAAATCTCTTGCTCTAATCTCTTCTTTACCATGATTTTTTCTAATATCAATAAAATCAA 1414713 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 || ||||||||||||||||| | ||| ||||| | |||| || ||||||||||| | Sbjct 1414714 AAATGTCAGCATGCCATGGTTCAAGATAGATTGCAAAGGCACCAGGACGTTTATTACCAC 1414773 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 ||||||| | |||||| ||||| | || | |||||||||||||||| ||||||||| | Sbjct 1414774 CTTGATCAACATATCTTGCAGTCATATTGAATACTCTTAACATTGGGATAATACCATTGG 1414833 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATA 48482 | ||||||| || || | |||||| || | ||||| |||||| ||| || || | Sbjct 1414834 AAGTACCATTAGTACCTGCAATATATGAACCGGTTGCTCTGATATTATGAATATGTAA-A 1414892 Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAG----GGTATCATAAAT 48538 ||||||||||| || ||| || || | | || ||| || ||||| | || Sbjct 1414893 CCTATACCACCAGCATGTTTTGAAATAACGG----CCATTTCAGACAAAGTATCGAATAT 1414948 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACA 48598 || | ||| |||||| |||| | ||||||||| |||||||||||| | Sbjct 1414949 ACCATTTATTGAATCATCCTTCATTGCAACAAGAAAACAAGAAGACATTTGCGGCTTTGG 1415008 Query 48599 AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTT 48658 |||||| | ||| |||||||||||||| |||||| | || |||| || | || || Sbjct 1415009 AGTTCCAGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATTTTAGAGACATTAAATT 1415068 Query 48659 ATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAA 48718 ||| ||||||| |||| || |||| ||| ||||| | | || | ||| | Sbjct 1415069 ATAAGTTTCAAGAACACGCTCGATATTATCACCATGAATACCAACCGCAACTCTCATAAT 1415128 Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778 || || |||||||||||| | | ||| ||| ||| | || | ||| ||| |||| | Sbjct 1415129 CAAATGTTGAGGTCTTTCGGCCACTTTACCATTAATTCTTAATAAATAAGATCTTTCAAG 1415188 Query 48779 TGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATT- 48835 |||||||| |||||| | || || ||||| || ||||| || |||| || || Sbjct 1415189 AGTTTTAAAGCCAAAAAAATTATAGTTGAAA--TCACGATCATAAACGATTGCAGAGTTA 1415246 Query 48836 ---TATTC------TTTCCTTATGTTTATAT-ACTA-CATC-CATTACAT------TTTT 48877 | ||| |||| ||| || ||| | || |||| || ||| | | Sbjct 1415247 AGCTCTTCAGAATGTTTCATTACACTTTTATAAGTATCATCAGATATCATCGGAGCATGT 1415306 Query 48878 TGATATAATT---GAT-----TCCTTGTAAAGATCTTCTACAACATCACTAAATAttttt 48929 || | | || | | | || ||||||||| | |||| | |||| ||| Sbjct 1415307 TGGTCTGTTTTTGGGTTAACATAATTATAAAGATCTGAAATAACAGCCGAAAATTGTTTC 1415366 Query 48930 tttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGA 48989 ||||||| ||||| | ||||| |||| |||||| ||||| || ||||||||||| ||| Sbjct 1415367 TTTGTTTGCTTATGTAAGTTAGAAATAGCTATTCTGGCAGCCAAAATAGCATAATCAGGA 1415426 Query 48990 TGAATTGTTGTACATGT-ACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGT 49048 |||| || || ||| | | || |||| || || | |||| ||||| |||||| Sbjct 1415427 TGAACAGTAGT-CATATAAGCAGCAGTTTCAGCAGCAAGATTATCCAATTCAGCAGTAGT 1415485 Query 49049 TACACCTGTATATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATC 49108 ||||| ||| | || |||||| | | || || || | ||| | ||||| Sbjct 1415486 GACACCATGATAAACACCGGATATAACTCTTTGAGTAATTTTAACAGCATCGACATGATT 1415545 Query 49109 CATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATT 49168 | ||| | |||||||| | | | | ||||| || |||||||| || | | Sbjct 1415546 CGAATCTAAGCCATAACAAAGTCGTGAAACTCTAGCAGTTATTTTATCGAAACGAACTTG 1415605 Query 49169 CTCTTTACGACCGTCACGTTTTAT-AACAAACAT 49201 ||||| || || || | |||||| ||||||||| Sbjct 1415606 TTCTTTTCGTCCATCTC-TTTTATAAACAAACAT 1415638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108301128440