Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascoidea_20asiatica_20[genbank_20GCA_5F001600695.1_202016-03-01] 71 sequences; 20,313,720 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq15 435 4e-117 >seq15 Length=386167 Score = 435 bits (482), Expect = 4e-117 Identities = 637/898 (71%), Gaps = 17/898 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || ||||||||| || |||| | |||| |||||||| || || || | Sbjct 129435 CATAACACCAGCTTTTTGATAATCAGATACTCTTTTTTCAAAAAAATTAGTTTTACCAGC 129376 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 || || |||||||||||||||||||||||||| |||| || |||| | | | Sbjct 129375 TAAAGAAATATTTTCCATAAAATCAAATGGATT---TGTAACAT-TATAAAATT---TTT 129323 Query 36992 TAATTCCTTCAGAAGC-------CTATCCGCAACAAATTCTATGTATTTACACATTAGTT 37044 || | ||| || | | ||||| ||||||||||| | |||| |||||||| || Sbjct 129322 TATTACCTAAAGCAACTAATAATCTATCTGCAACAAATTCAACATATTGACACATTAATT 129263 Query 37045 CATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTA 37104 | | || ||||| | || | || | ||||| || | | |||||| || Sbjct 129262 TACAATTCATACCTAATAAAGAAGCAGGTAAAGCATCAGTAAAATAATCTTTTTCAATAT 129203 Query 37105 TTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATT 37164 ||||| || ||| || || || || | | | |||| || |||||| Sbjct 129202 CAACAGCTTCAGTAATAATTTTTTGAACAATTAATGGATTTGGTTTATTAATTAAATGAG 129143 Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 ||| |||||||| ||||||||| ||| | |||||||||||||| || |||||||| | Sbjct 129142 AAAATAATAAACAAGCAAAATCAGTATGAAGACCTTCATCTCTACAAATTAATTCATTTG 129083 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 |||| ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||| Sbjct 129082 AAAATGTTAAACCTGGCATTAAACCTCTTTTTTTTAACCAAAATATTGAAGCAAAAGATC 129023 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||||||||||||||| || ||||| || || | | | | | | | | Sbjct 129022 CAGAGAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCAGCATATAAAGCAT 128963 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 || |||| ||||||| || | ||| || || ||| ||||| |||| |||||||| Sbjct 128962 CATTATCATTAATCCATCTTAAAGCCCATTCAGCTTTTTGTTTAATACATGGAATTGTTT 128903 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 ||||||| || || | ||| || ||||||| |||| | ||||||||||| | || || Sbjct 128902 CAATTGCATTAAATAAAAATTTATTTTCTTTTGGATCTTTAATATAAGTATCTAATAATA 128843 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 || ||| ||||||| ||||||||||| || || ||||||||||||||||| ||| Sbjct 128842 AAGAATAAGTTTCAGAATGAATATTTTCCATCATAATTTGAAAACCATAAAAACATTTAG 128783 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | |||||| || | |||| | | | |||| ||||||||||| || |||| Sbjct 128782 CTTCAGGAATTTGAACTTCTGCAGAAAAATTTTCAACTAAATTTTCATTAACAATACCAT 128723 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATA 37641 || ||||||||| || || | ||| | |||||| ||||||| | |||| | Sbjct 128722 CAGAAGCTGCAAAAAATGCTAAAACTCTTGAAATAAAAAATCTTTCATTTTTATTTAAAC 128663 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701 || |||||||||| | |||||| |||||||| ||| || | |||||||| | Sbjct 128662 GATTATTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCTGCAGTCCAAAATGAAG 128603 Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 | || ||||||||| |||||| |||| || || |||||||||| ||||| Sbjct 128602 CTTCAGCTTTTTTATACATTTGCCAAATTTCATGATATTTAATTGGAAATAAAACAAA 128545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316274318840